RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TPX2Q9ULW0 747 aaKnown RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 JRKLQ9Y4A0 524 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.397e-9■■■■■ 29.7
TRA2A-209ENST00000494255 RNF103O00237 685 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 FSBPO95073 299 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 HLA-DQB2P05538 268 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 SLC45A4Q5BKX6 768 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 B4GALNT4Q76KP1 1039 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 ASCL5Q7RTU5 278 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 CAMK1DQ8IU85 385 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 SLC41A1Q8IVJ1 513 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 CDKL3Q8IVW4 592 aaPredicted RBP12.61□□□□□ -0.39
TRA2A-209ENST00000494255 RGL4Q8IZJ4 473 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 PIGKQ92643 395 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 QKIQ96PU8 341 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■□□□ 13.1
TRA2A-209ENST00000494255 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 SEMA3CQ99985 751 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
TRA2A-209ENST00000494255 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 WDFY4Q6ZS81 3184 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 NEMP1O14524 444 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 GFRA3O60609 400 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 SOCS5O75159 536 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 GJB3O75712 270 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ZNF189O75820 626 aaPredicted RBP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 PCDH8O95206 1070 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 CR2P20023 1033 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 CA4P22748 312 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ITPKAP23677 461 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 CCR5P51681 352 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 SUOXP51687 545 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ZBTB17Q13105 803 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 DARS2Q6PI48 645 aaKnown RBP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 SLC35F6Q8N357 371 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ARRDC1-AS1Q9H2J1 176 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ATP8A1Q9Y2Q0 1164 aa12.6□□□□□ -0.39
TRA2A-209ENST00000494255 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.6□□□□□ -0.39
TRA2A-209ENST00000494255 A0A1W2PQ67 120 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 TSPAN11A1L157 253 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 USP27XA6NNY8 438 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 AP1G1O43747 822 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 STK10O94804 968 aaKnown RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 SERPINF2P08697 491 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 RBP3P10745 1247 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 PTPN3P26045 913 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 MPLP40238 635 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 TAS2R38P59533 333 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 POLR2LP62875 67 aaKnown RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 DSC2Q02487 901 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 KLF1Q13351 362 aaPredicted RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 TEX44Q53QW1 395 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 RABEPKQ7Z6M1 372 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 PDCD6IPQ8WUM4 868 aaKnown RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 HTR3CQ8WXA8 447 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 VOPP1Q96AW1 172 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 AGAP3Q96P47 875 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 VAT1Q99536 393 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 CEP41Q9BYV8 373 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 MIR1-1HGQ9H1L0 117 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
TRA2A-209ENST00000494255 TNRC6BQ9UPQ9 1833 aaKnown RBP12.59□□□□□ -0.39
TRA2A-209ENST00000494255 ENC1O14682 589 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 TSPAN6O43657 245 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 RNGTTO60942 597 aaKnown RBP12.58□□□□□ -0.4
TRA2A-209ENST00000494255 LRP3O75074 770 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 GNSP15586 552 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 TIMP2P16035 220 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 NFKBIAP25963 317 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 HOXD12P35452 270 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ABL2P42684 1182 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ELP6Q0PNE2 266 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ERAP2Q6P179 960 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 PRPF39Q86UA1 669 aaKnown RBP12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 TRIM69Q86WT6 500 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 CNTD1Q8N815 330 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 BIRC7Q96CA5 298 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 FEM1CQ96JP0 617 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
TRA2A-209ENST00000494255 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms