RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CDH22Q9UJ99 828 aa2.52□□□□□ -2.01
LMNB1-207ENST00000494185 ICKQ9UPZ9 632 aa2.52□□□□□ -2.01
LMNB1-207ENST00000494185 TRBV5-7A0A0A0MS05 114 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 A0A1W2PPC1 479 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 A0A1W2PRQ8 180 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ARHGAP10A1A4S6 786 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 TYW5A2RUC4 315 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 DENND3A2RUS2 1198 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 C17orf100A8MU93 164 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 STMND1H3BQB6 276 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 TSPAN4O14817 238 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 SPRY3O43610 288 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ATG13O75143 517 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CHRM4P08173 479 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HOXB2P14652 356 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ZNF8P17098 575 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CHRNB2P17787 502 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ALOX12P18054 663 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CCR9P51686 369 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 FOXG1P55316 489 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HDAC4P56524 1084 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ARF3P61204 181 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ARF1P84077 181 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 RUNX2Q13950 521 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 EIF4A2Q14240 407 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 KRT32Q14532 448 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 NAA25Q14CX7 972 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 GPR68Q15743 365 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 SLC18A3Q16572 532 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 NFIL3Q16649 462 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 TSTQ16762 297 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 SLC9C2Q5TAH2 1124 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 KIAA1161Q6NSJ0 714 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 FAM122CQ6P4D5 195 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ZNF517Q6ZMY9 492 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 IRF2BP2Q7Z5L9 587 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ADGRG6Q86SQ4 1221 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ZDHHC17Q8IUH5 632 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 FAM9BQ8IZU0 186 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 NGEFQ8N5V2 710 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 IQCF1Q8N6M8 205 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HORMAD2Q8N7B1 307 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 LSM14AQ8ND56 463 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 SETD9Q8NE22 299 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CMASQ8NFW8 434 aaPredicted RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 OR14A16Q8NHC5 309 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 RFWD2Q8NHY2 731 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CREB3L4Q8TEY5 395 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 RAB40AQ8WXH6 277 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HSPH1Q92598 858 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 CNOT9Q92600 299 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 NSUN4Q96CB9 384 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 RNF183Q96D59 192 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 MSI2Q96DH6 328 aaKnown RBP2.51□□□□□ -2.01
LMNB1-207ENST00000494185 MTBPQ96DY7 904 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 RNF125Q96EQ8 232 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 MARK4Q96L34 752 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 FUZQ9BT04 418 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 EPHX3Q9H6B9 360 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 ANKEF1Q9NU02 776 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HDAC6Q9UBN7 1215 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 HSF4Q9ULV5 492 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 MST1RQ04912 1400 aa2.51□□□□□ -2.01
LMNB1-207ENST00000494185 PASKQ96RG2 1323 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 GOLGA6L10A0A0M3HER8 536 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 TARSL2A2RTX5 802 aaKnown RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM90A7PA6NKC0 464 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM90A22PA8MWA6 464 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM90A12PA8MX19 464 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM90A23PA8MXZ1 464 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM157AC9JC47 383 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ACOT8O14734 319 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 TNFRSF13BO14836 293 aaPredicted RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PER2O15055 1255 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 KCNAB3O43448 404 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ITM2AO43736 263 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 LIASO43766 372 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SERPINI2O75830 405 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 F9P00740 461 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ADAP00813 363 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SERPINC1P01008 464 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 RPN1P04843 607 aaKnown RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CLEC3BP05452 202 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ACADMP11310 421 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 DAOP14920 347 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PTPN2P17706 415 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ITGB6P18564 788 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CD72P21854 359 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 RRM1P23921 792 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ABCD3P28288 659 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 TNFSF8P32971 234 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 HOXD13P35453 343 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 DPP6P42658 865 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PTPN9P43378 593 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 NUDT6P53370 316 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 POU3F1Q03052 451 aaPredicted RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 RPE65Q16518 533 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SYTL3Q4VX76 610 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms