RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TMC6Q7Z403 805 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 TP53INP2Q8IXH6 220 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 CACTIN-AS1Q8N1I8 211 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 DENND6BQ8NEG7 585 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 C1QTNF2Q9BXJ5 285 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 ABCG4Q9H172 646 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 LRRC19Q9H756 370 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 PARVAQ9NVD7 372 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 NCKIPSDQ9NZQ3 722 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 NBEAQ8NFP9 2946 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 LRP4O75096 1905 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 DSPP15924 2871 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 LY6G6EA0A0G2JKS1 128 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SPTY2D1-AS1A0A0U1RR47 76 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 EIF3CLB5ME19 914 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 J3KR12 359 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 TOR1BO14657 336 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 AREL1O15033 823 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SCAMP1O15126 338 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 RRP8O43159 456 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 DAPK3O43293 454 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 TM7SF2O76062 418 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 RNF8O76064 485 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 CSF2P04141 144 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SKILP12757 684 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 RGRP47804 291 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 ZNF165P49910 485 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SUOXP51687 545 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 TPI1P60174 286 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SERINC3Q13530 473 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 PDE1CQ14123 709 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 ARHGAP36Q6ZRI8 547 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 NPWQ8N729 165 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 GLMNQ92990 594 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 CELF6Q96J87 481 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 KCTD15Q96SI1 283 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 EIF3CQ99613 913 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 AIPL1Q9NZN9 384 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 UBA2Q9UBT2 640 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 MFHAS1Q9Y4C4 1052 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 CSNK1G3Q9Y6M4 447 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 U3KQA8 63 aa13.56□□□□□ -0.24
CTDSP1-212ENST00000494067 A0A1W2PQC6 194 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 TMEM191CA6NGB0 347 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 ARHGAP42A6NI28 874 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 PIGNO95427 931 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 MT-CO3P00414 261 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 CKMT1AP12532 417 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 JUNDP17535 347 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 PSMA2P25787 234 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 PBX1P40424 430 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 PRKCIP41743 596 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 NDST2P52849 883 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 INSM1Q01101 510 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 SEMG2Q02383 582 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 FZD2Q14332 565 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 NR1I3Q14994 352 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 ASIC2Q16515 512 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 HGSNATQ68CP4 663 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 ZCCHC8Q6NZY4 707 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 ZSWIM9Q86XI8 627 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 UMODL1-AS1Q8N2C9 162 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 HCAR2Q8TDS4 363 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 SPASTQ9UBP0 616 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 DKK3Q9UBP4 350 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
CTDSP1-212ENST00000494067 SYCE3A1L190 88 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 EEF2KO00418 725 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 CASC3O15234 703 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 AQP9O43315 295 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 NEBLO76041 1014 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 FTLP02792 175 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 GP1BAP07359 652 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 NME1P15531 152 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 TIMP2P16035 220 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 IL1R2P27930 398 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 ACTN2P35609 894 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 IGFALSP35858 605 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 ABCG1P45844 678 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 RPIAP49247 311 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 YPEL5P62699 121 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 TPM4P67936 248 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 RTP5Q14D33 572 aa13.54□□□□□ -0.24
CTDSP1-212ENST00000494067 ERMARDQ5T6L9 678 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms