RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 MYOCQ99972 504 aa16.34■□□□□ 0.21
SATB1-217ENST00000493952 DKK3Q9UBP4 350 aa16.34■□□□□ 0.21
SATB1-217ENST00000493952 CA5BQ9Y2D0 317 aa16.34■□□□□ 0.21
SATB1-217ENST00000493952 LRP4O75096 1905 aa16.34■□□□□ 0.21
SATB1-217ENST00000493952 TSPAN11A1L157 253 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 ZNF487B1APH4 448 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 AREL1O15033 823 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 SLC31A1O15431 190 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 CER1O95813 267 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 ITIH2P19823 946 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 GARSP41250 739 aaKnown RBP16.33■□□□□ 0.2
SATB1-217ENST00000493952 CTSKP43235 329 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 NSUN2Q08J23 767 aaKnown RBP eCLIP16.33■□□□□ 0.2
SATB1-217ENST00000493952 GRM3Q14832 879 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 PPM1JQ5JR12 505 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 KIAA1161Q6NSJ0 714 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 TTC7BQ86TV6 843 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 SUV39H2Q9H5I1 410 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 FZD3Q9NPG1 666 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 DDX56Q9NY93 547 aaKnown RBP16.33■□□□□ 0.2
SATB1-217ENST00000493952 FNDC3AQ9Y2H6 1198 aaKnown RBP16.33■□□□□ 0.2
SATB1-217ENST00000493952 ALG6Q9Y672 507 aa16.33■□□□□ 0.2
SATB1-217ENST00000493952 TTC24A2A3L6 582 aaPredicted RBP16.32■□□□□ 0.2
SATB1-217ENST00000493952 PRAMEF26H0Y7S4 382 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 NEMP1O14524 444 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 KCNK3O14649 394 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 PSTPIP1O43586 416 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 TSPAN6O43657 245 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 CD59P13987 128 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 TIMP2P16035 220 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 CR2P20023 1033 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 KCNA4P22459 653 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 SERPINA4P29622 427 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 SCNN1BP51168 640 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 RENBPP51606 427 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 C21orf59P57076 290 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 RPS21P63220 83 aaKnown RBP16.32■□□□□ 0.2
SATB1-217ENST00000493952 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
SATB1-217ENST00000493952 FGL2Q14314 439 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 SLC9A4Q6AI14 798 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 ZSWIM9Q86XI8 627 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 VSIG1Q86XK7 387 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 LRRC49Q8IUZ0 686 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 PLD5Q8N7P1 536 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 TMEM145Q8NBT3 493 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 TPCN2Q8NHX9 752 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 HCAR2Q8TDS4 363 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 RNF25Q96BH1 459 aaPredicted RBP16.32■□□□□ 0.2
SATB1-217ENST00000493952 FEM1CQ96JP0 617 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 ZNF641Q96N77 438 aaPredicted RBP16.32■□□□□ 0.2
SATB1-217ENST00000493952 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 ATP13A3Q9H7F0 1226 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 DTLQ9NZJ0 730 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
SATB1-217ENST00000493952 COL5A1P20908 1838 aaPredicted RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 H0Y8X5 98 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 PJA2O43164 708 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 KCNK5O95279 499 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 CSRP1P21291 193 aaKnown RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 HNRNPA2B1P22626 353 aaKnown RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 HSPA9P38646 679 aaKnown RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 MMP13P45452 471 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 VAV2P52735 878 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MAXP61244 160 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 AP1S1P61966 158 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 STAT4Q14765 748 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 UGP2Q16851 508 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 SLC45A4Q5BKX6 768 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MARC1Q5VT66 337 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 PIP4P1Q86T03 277 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 BBS5Q8N3I7 341 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MFSD2AQ8NA29 543 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 DEFB124Q8NES8 71 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.31■□□□□ 0.2
SATB1-217ENST00000493952 NSMCE1Q8WV22 266 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 SKA1Q96BD8 255 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MGME1Q9BQP7 344 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 DESI2Q9BSY9 194 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 SLC17A9Q9BYT1 436 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 TM7SF3Q9NS93 570 aa16.31■□□□□ 0.2
SATB1-217ENST00000493952 MED19A0JLT2 244 aaPredicted RBP16.3■□□□□ 0.2
SATB1-217ENST00000493952 IGLON5A6NGN9 336 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 BTNL10A8MVZ5 291 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 GOLGA6L6A8MZA4 724 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 TLR4O00206 839 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 GIPC1O14908 333 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 PAK4O96013 591 aaPredicted RBP16.3■□□□□ 0.2
SATB1-217ENST00000493952 CCNCP24863 283 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 AKT2P31751 481 aa16.3■□□□□ 0.2
SATB1-217ENST00000493952 NOVA1P51513 510 aaKnown RBP16.3■□□□□ 0.2
SATB1-217ENST00000493952 NXPH1P58417 271 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms