RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 VPS36Q86VN1 386 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 DNAAF5Q86Y56 855 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 APOLD1Q96LR9 279 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 CPEB1Q9BZB8 566 aaKnown RBP23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 HAUS4Q9H6D7 363 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 USP29Q9HBJ7 922 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 AK5Q9Y6K8 562 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 TDRD6O60522 2096 aaKnown RBP23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 LAMA5O15230 3695 aa23.96■■□□□ 1.43
RHBDD3-206ENST00000493894 K7ESM1 405 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 EEF2KO00418 725 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 NEBLO76041 1014 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 RNF8O76064 485 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 IGFALSP35858 605 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 ZNF165P49910 485 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 DUSP3P51452 185 aaPredicted RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 SUOXP51687 545 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 ELP6Q0PNE2 266 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 PTK2BQ14289 1009 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 GRM3Q14832 879 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 RTP5Q14D33 572 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 CYTH1Q15438 398 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 TPRG1LQ5T0D9 272 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 CAVIN1Q6NZI2 390 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 DCBLD1Q8N8Z6 715 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 FAM181AQ8N9Y4 354 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 CENPTQ96BT3 561 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 CELF6Q96J87 481 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 WRAP53Q9BUR4 548 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 SNRNP25Q9BV90 132 aaKnown RBP23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 PDFQ9HBH1 243 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 PCSK1NQ9UHG2 260 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 ITPR1Q14643 2758 aa23.95■■□□□ 1.42
RHBDD3-206ENST00000493894 A0A087WV48 116 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 ARHGAP42A6NI28 874 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 INSIG1O15503 277 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 AQP9O43315 295 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 MMP20O60882 483 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 PIGNO95427 931 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 GZMAP12544 262 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 JUNDP17535 347 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 PRKCIP41743 596 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 CA9Q16790 459 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 CFAP58Q5T655 872 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 ERMARDQ5T6L9 678 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 E4F1Q66K89 784 aaPredicted RBP23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 ZCCHC8Q6NZY4 707 aaKnown RBP23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 KDM7AQ6ZMT4 941 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 ZNF571Q7Z3V5 609 aaPredicted RBP23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 PDZD3Q86UT5 571 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 FNIP1Q8TF40 1166 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 BTN2A2Q8WVV5 523 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 ZNF653Q96CK0 615 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 DCBLD2Q96PD2 775 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 PEBP4Q96S96 227 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 AIPL1Q9NZN9 384 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 CNOT8Q9UFF9 292 aaKnown RBP23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 CSNK1G3Q9Y6M4 447 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 SCINQ9Y6U3 715 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 CACNA1GO43497 2377 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 MYLKQ15746 1914 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 KNTC1P50748 2209 aa23.94■■□□□ 1.42
RHBDD3-206ENST00000493894 A0A1B0GTH6 734 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 TMEM191CA6NGB0 347 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 J3KR12 359 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 DAPK3O43293 454 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 PRPSAP2O60256 369 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 PRAMEF11O60813 436 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 MT-CO3P00414 261 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 GP1BAP07359 652 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 TIMP2P16035 220 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 SEMG2Q02383 582 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 KLHL30Q0D2K2 578 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 RFX8Q6ZV50 586 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 LMX1AQ8TE12 382 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 TRIM11Q96F44 468 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 NCKIPSDQ9NZQ3 722 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 APOBEC3BQ9UH17 382 aaKnown RBP23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 CELSR3Q9NYQ7 3312 aa23.93■■□□□ 1.42
RHBDD3-206ENST00000493894 TSPAN11A1L157 253 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 TOR1BO14657 336 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 FTLP02792 175 aaPredicted RBP23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 ITIH2P19823 946 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 PAPOLAP51003 745 aaKnown RBP23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 YPEL5P62699 121 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 EIF2B5Q13144 721 aaKnown RBP23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 KLHL40Q2TBA0 621 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 ARFGAP1Q8N6T3 406 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 TP53I13Q8NBR0 393 aaPredicted RBP23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 HCAR2Q8TDS4 363 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 KCTD15Q96SI1 283 aaPredicted RBP23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 SLC39A8Q9C0K1 460 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 SUV39H2Q9H5I1 410 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 SPASTQ9UBP0 616 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 KLF15Q9UIH9 416 aa23.92■■□□□ 1.42
RHBDD3-206ENST00000493894 LY6G6EA0A0G2JKS1 128 aa23.91■■□□□ 1.42
RHBDD3-206ENST00000493894 DDX3XO00571 662 aaKnown RBP eCLIP23.91■■□□□ 1.421e-9■■■■□ 20.5
RHBDD3-206ENST00000493894 RIOK3O14730 519 aaKnown RBP23.91■■□□□ 1.42
RHBDD3-206ENST00000493894 OPA1O60313 960 aa23.91■■□□□ 1.42
RHBDD3-206ENST00000493894 SERPINC1P01008 464 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms