RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SLC8A1P32418 973 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 MPP1Q00013 466 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 IRF9Q00978 393 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ITGA9Q13797 1035 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 TAF12Q16514 161 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 HSF5Q4G112 596 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SIRPB2Q5JXA9 342 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SPOUT1Q5T280 376 aaKnown RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 DENND6AQ8IWF6 608 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 STON2Q8WXE9 905 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 IFT43Q96FT9 208 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 TSPAN17Q96FV3 270 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ACE2Q9BYF1 805 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 TASP1Q9H6P5 420 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 CYP4F11Q9HBI6 524 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 FBXO6Q9NRD1 293 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 OXSMQ9NWU1 459 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 STOML2Q9UJZ1 356 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ZFP37Q9Y6Q3 630 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 NUMBLQ9Y6R0 609 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 A0A1B0GVM2 712 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 TCAF2A6NFQ2 919 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ITM2AO43736 263 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 URODP06132 367 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 HOXB8P17481 243 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 CREMQ03060 361 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 CTBP1Q13363 440 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ADGRF1Q5T601 910 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 DDX53Q86TM3 631 aaKnown RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ACVR1CQ8NER5 493 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 OR13J1Q8NGT2 312 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 STYXQ8WUJ0 223 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 PSKH2Q96QS6 385 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 KLF16Q9BXK1 252 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 NMUR2Q9GZQ4 415 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 NOD2Q9HC29 1040 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 SPG21Q9NZD8 308 aa10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-204ENST00000493669 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CLTBP09497 229 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CORO1AP31146 461 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ABCG1P45844 678 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 SLC12A2P55011 1212 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 OXCT1P55809 520 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 LIPMQ5VYY2 423 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 SLC41A1Q8IVJ1 513 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 HERC6Q8IVU3 1022 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TCEAL8Q8IYN2 117 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 VWCEQ96DN2 955 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 PRICKLE1Q96MT3 831 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 BEGAINQ9BUH8 593 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TBC1D10AQ9BXI6 508 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ARL8BQ9NVJ2 186 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 APOBEC2Q9Y235 224 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TBC1D30Q9Y2I9 924 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CAPN14A8MX76 684 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 KLHL2O95198 593 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 KITP10721 976 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 PPM1AP35813 382 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 NSUN2Q08J23 767 aaKnown RBP eCLIP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF177Q13360 481 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 IHHQ14623 411 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 KDELC2Q7Z4H8 507 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ALYREFQ86V81 257 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 UTP4Q969X6 686 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 MARCOQ9UEW3 520 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 LYPLA1O75608 230 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 NDST3O95803 873 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 RHOCP08134 193 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ESRRAP11474 423 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ELF1P32519 619 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 SLC26A3P40879 764 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 EPHB3P54753 998 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 PLD1Q13393 1074 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 IL31Q6EBC2 164 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 LRRC8EQ6NSJ5 796 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CILP2Q8IUL8 1156 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CENPLQ8N0S6 344 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CFAP52Q8N1V2 620 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TMEM151AQ8N4L1 468 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 GPR150Q8NGU9 434 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 ELMO2Q96JJ3 720 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 RILPQ96NA2 401 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 CINPQ9BW66 212 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 BAIAP2L1Q9UHR4 511 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 STK38LQ9Y2H1 464 aa10.88□□□□□ -0.67
PHACTR4-204ENST00000493669 TARM1B6A8C7 271 aa10.87□□□□□ -0.67
PHACTR4-204ENST00000493669 PHGDHO43175 533 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms