RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 PYROXD2Q8N2H3 581 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 SDR16C5Q8N3Y7 309 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ZNF548Q8NEK5 533 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
COL6A1-205ENST00000492851 FGF11Q92914 225 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 TUBGCP5Q96RT8 1024 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 MAGEB5Q9BZ81 275 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 SLC13A1Q9BZW2 595 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 SUV39H2Q9H5I1 410 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 NOL6Q9H6R4 1146 aaKnown RBP12.61□□□□□ -0.39
COL6A1-205ENST00000492851 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-205ENST00000492851 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 PKD1L2Q7Z442 2459 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 CFAP69A5D8W1 941 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ARHGAP42A6NI28 874 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 OPA1O60313 960 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ATP1A3P13637 1013 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 TIMP2P16035 220 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 PSMA2P25787 234 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 HTR1BP28222 390 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 EIF2S3P41091 472 aaKnown RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 CSNK1DP48730 415 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 NSUN2Q08J23 767 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 RFTN1Q14699 578 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ACAP1Q15027 740 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 UGP2Q16851 508 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 TMEM52BQ4KMG9 183 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ZNF542PQ5EBM4 170 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 CDCP2Q5VXM1 449 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 PLEKHA7Q6IQ23 1121 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 LZTR1Q8N653 840 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 FNIP1Q8TF40 1166 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 TRIM11Q96F44 468 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 LRRC19Q9H756 370 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 AIPL1Q9NZN9 384 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 ANKRD11Q6UB99 2663 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-205ENST00000492851 FREM2Q5SZK8 3169 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
COL6A1-205ENST00000492851 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 EEF2KO00418 725 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 MMP20O60882 483 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 MYBL1P10243 752 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 HCAR3P49019 387 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 LRRC14Q15048 493 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 AGERQ15109 404 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 CYTH1Q15438 398 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 ASIC2Q16515 512 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 ESRP1Q6NXG1 681 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 LVRNQ6Q4G3 990 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 MACC1Q6ZN28 852 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 FSTL5Q8N475 847 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 IFI44Q8TCB0 444 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 HSD3B7Q9H2F3 369 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 DHX35Q9H5Z1 703 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
COL6A1-205ENST00000492851 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
COL6A1-205ENST00000492851 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 A0A1W2PQ67 120 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-205ENST00000492851 LRRC53A6NM62 1247 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 LMO7DNF2Z398 122 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 PALMO75781 387 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ANXA6P08133 673 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 ALPIP09923 528 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 NFKBIAP25963 317 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 SERPINA4P29622 427 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
COL6A1-205ENST00000492851 PRKCIP41743 596 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 LSSP48449 732 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 RENBPP51606 427 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 PPARDQ03181 441 aa12.58□□□□□ -0.4
COL6A1-205ENST00000492851 EIF2B5Q13144 721 aaKnown RBP12.58□□□□□ -0.4
COL6A1-205ENST00000492851 NR0B2Q15466 257 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms