RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LRIG2O94898 1065 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 CALB1P05937 261 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 UNGP13051 313 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RBMS1P29558 406 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SOX5P35711 763 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ACVRL1P37023 503 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 PEX19P40855 299 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 STAT1P42224 750 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 NSFP46459 744 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 JAM2P57087 298 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 GABREP78334 506 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SKOR1P84550 965 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ATP11AP98196 1134 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 FMO1Q01740 532 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 EIF2B5Q13144 721 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 EIF3IQ13347 325 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ELOCQ15369 112 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 PARP15Q460N3 678 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 TMEM52BQ4KMG9 183 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 C6orf132Q5T0Z8 1188 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 FKBP15Q5T1M5 1219 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RWDD4Q6NW29 188 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ESRP1Q6NXG1 681 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 PPP1R2P3Q6NXS1 205 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 MACC1Q6ZN28 852 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RBM44Q6ZP01 1051 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SLFN11Q7Z7L1 901 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 TTC7BQ86TV6 843 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 PHF13Q86YI8 300 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 UMODL1-AS1Q8N2C9 162 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RYBPQ8N488 228 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 EMC1Q8N766 993 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 OR6C4Q8NGE1 309 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ATL2Q8NHH9 583 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 RNF217Q8TC41 542 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 LMX1AQ8TE12 382 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 VOPP1Q96AW1 172 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SLC46A1Q96NT5 459 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 EIF3CQ99613 913 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SLC13A1Q9BZW2 595 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 TM6SF2Q9BZW4 377 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 GANQ9H2C0 597 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 ASCL3Q9NQ33 180 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 CHMP5Q9NZZ3 219 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 NEU3Q9UQ49 428 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 BPTFQ12830 3046 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 GCN1Q92616 2671 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 KALRNO60229 2985 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ARID1BQ8NFD5 2236 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 TSPAN11A1L157 253 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ANKRD62A6NC57 917 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 PES1O00541 588 aaKnown RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 FGF10O15520 208 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 SPINT1O43278 529 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 BUB1O43683 1085 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 GFPT2O94808 682 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 IGSF6O95976 241 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 MPOP05164 745 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 UGT2B4P06133 528 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ANXA6P08133 673 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ALPIP09923 528 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 DESP17661 470 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CHRNB2P17787 502 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ABL2P42684 1182 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CSNK1DP48730 415 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 HDAC4P56524 1084 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CXADRP78310 365 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 PPARDQ03181 441 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 PTP4A2Q12974 167 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 SERINC3Q13530 473 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 C15orf59Q2T9L4 293 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 C2CD6Q53TS8 623 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF542PQ5EBM4 170 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CDKAL1Q5VV42 579 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 XKR5Q6UX68 686 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 EFL1Q7Z2Z2 1120 aaKnown RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CLEC14AQ86T13 490 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 PHACTR4Q8IZ21 702 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ARL14Q8N4G2 192 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 C3orf20Q8ND61 904 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 WDR36Q8NI36 951 aaKnown RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CXorf40AQ8TE69 158 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 FAM172AQ8WUF8 416 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 KCNE4Q8WWG9 221 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF641Q96N77 438 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 KLHL32Q96NJ5 620 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 MYCBPQ99417 103 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 SELENOOQ9BVL4 669 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 NUP62CLQ9H1M0 184 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CATSPERBQ9H7T0 1116 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
HDAC3-212ENST00000492407 NDFIP2Q9NV92 336 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 APOBEC3BQ9UH17 382 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms