RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KRIT1O00522 736 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 FPGTO14772 594 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 BUB1O43683 1085 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 OPA1O60313 960 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 PRAMEF11O60813 436 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 MT-CO3P00414 261 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 UGT2B4P06133 528 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 CDK11BP21127 795 aaKnown RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 EIF2S3P41091 472 aaKnown RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 YPEL5P62699 121 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 TYRO3Q06418 890 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 NSUN2Q08J23 767 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 SGCGQ13326 291 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 GRM3Q14832 879 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 COL28A1Q2UY09 1125 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 SOWAHCQ53LP3 525 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 ATXN7L2Q5T6C5 722 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 E4F1Q66K89 784 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 C19orf48Q6RUI8 117 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 TMC6Q7Z403 805 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 ZNF548Q8NEK5 533 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 ZNF641Q96N77 438 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 MCEEQ96PE7 176 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 TUBGCP5Q96RT8 1024 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 MYOCQ99972 504 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 FUCA2Q9BTY2 467 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 BOCQ9BWV1 1114 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 CALN1Q9BXU9 219 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 EDEM3Q9BZQ6 932 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 CATSPERBQ9H7T0 1116 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 PARVAQ9NVD7 372 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 DONSONQ9NYP3 566 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 SALL4Q9UJQ4 1053 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 CLCA2Q9UQC9 943 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 ITM2BQ9Y287 266 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 SSUH2Q9Y2M2 353 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 ARHGEF17Q96PE2 2063 aaPredicted RBP8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 EME2A4GXA9 379 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 CFAP69A5D8W1 941 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 GOLGA6L22H0YM25 854 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 DDX3XO00571 662 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 INSIG1O15503 277 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 TLX3O43711 291 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 BUB1BO60566 1050 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 GCATO75600 419 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 IGFALSP35858 605 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 PEX5P50542 639 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ZNF135P52742 658 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 RAD51Q06609 339 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 NR1I3Q14994 352 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 CA9Q16790 459 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 UGP2Q16851 508 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 CCDC157Q569K6 752 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ERMARDQ5T6L9 678 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ZCCHC8Q6NZY4 707 aaKnown RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 SCYL2Q6P3W7 929 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 LEKR1Q6ZMV7 388 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ZNF571Q7Z3V5 609 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 PTAR1Q7Z6K3 402 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 TTC7BQ86TV6 843 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 DNAAF5Q86Y56 855 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ARHGAP12Q8IWW6 846 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 AOPEPQ8N6M6 819 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 TP53I13Q8NBR0 393 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 HNRNPLLQ8WVV9 542 aaKnown RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 GRAMD1AQ96CP6 724 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ECHDC3Q96DC8 303 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 HIC2Q96JB3 615 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 NAP1L5Q96NT1 182 aaPredicted RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 PEBP4Q96S96 227 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 SLC39A8Q9C0K1 460 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 NAT10Q9H0A0 1025 aaKnown RBP8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 ISCUQ9H1K1 167 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 DNAJC28Q9NX36 388 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 NCKIPSDQ9NZQ3 722 aa8.47□□□□□ -1.05
SMARCB1-207ENST00000491967 AHCTF1Q8WYP5 2266 aa8.46□□□□□ -1.05
SMARCB1-207ENST00000491967 LRRC53A6NM62 1247 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 TMEM110-MUSTN1A8MSY1 372 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 LMO7DNF2Z398 122 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 J3KR12 359 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 TRAFD1O14545 582 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 FFAR2O15552 330 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 AQP9O43315 295 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 CREB3O43889 395 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 MMP20O60882 483 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 NEBLO76041 1014 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 TM7SF2O76062 418 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 IGSF6O95976 241 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 PEX11BO96011 259 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 FTLP02792 175 aaPredicted RBP8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ALPPL2P10696 532 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 JUNDP17535 347 aa8.46□□□□□ -1.06
SMARCB1-207ENST00000491967 ITIH2P19823 946 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms