RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TNRC6BQ9UPQ9 1833 aaKnown RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 THADAQ6YHU6 1953 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 CLDN11O75508 207 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 MYBL1P10243 752 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 NDUFV2P19404 249 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 IVDP26440 423 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 SLC1A1P43005 524 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 STK19P49842 368 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 PLK1P53350 603 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 COPAP53621 1224 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 NRG1Q02297 640 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 LMNB2Q03252 620 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 ZNF177Q13360 481 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 FNDC3BQ53EP0 1204 aaKnown RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 RNF219Q5W0B1 726 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 SERPINA13PQ6UXR4 307 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 RELL1Q8IUW5 271 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 ZNF557Q8N988 423 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 GAB3Q8WWW8 586 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 TRIM11Q96F44 468 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 RPL10LQ96L21 214 aaKnown RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 RMDN2Q96LZ7 410 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 FEM1AQ9BSK4 669 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 MKRN2Q9H000 416 aaKnown RBP9.56□□□□□ -0.88
BRCA1-219ENST00000491747 ETNK1Q9HBU6 452 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 GPATCH2LQ9NWQ4 482 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 NINJ2Q9NZG7 142 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 TBK1Q9UHD2 729 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 ANAPC7Q9UJX3 599 aa9.56□□□□□ -0.88
BRCA1-219ENST00000491747 SPAG17Q6Q759 2223 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 A0A0D9SEW6 157 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 FAM47DPA6NHR8 397 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 RASA4BC9J798 803 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 LIN7AO14910 233 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CLGNO14967 610 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 NPC1O15118 1278 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 RASA4O43374 803 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 RPP40O75818 363 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 LRIG2O94898 1065 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 LMNAP02545 664 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 EPHX1P07099 455 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 TCF4P15884 667 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 BCKDHBP21953 392 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CCNG1P51959 295 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 SCAPQ12770 1279 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 MPP2Q14168 576 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 SIM2Q14190 667 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 LLGL1Q15334 1064 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CA9Q16790 459 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ARL13BQ3SXY8 428 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ANKRD20A2Q5SQ80 823 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ANKRD20A1Q5TYW2 823 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ANKRD20A3Q5VUR7 823 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 KBTBD6Q86V97 674 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CPNE8Q86YQ8 564 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 KIRREL3Q8IZU9 778 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ABCA7Q8IZY2 2146 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 FNIP1Q8TF40 1166 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 MRGPRX1Q96LB2 322 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ZNF570Q96NI8 536 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 FOXP3Q9BZS1 431 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PPARGC1AQ9UBK2 798 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PLA2G4CQ9UP65 541 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 SCINQ9Y6U3 715 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 TTC34A8MYJ7 566 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 GFRA3O60609 400 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 LRCH4O75427 683 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ALDH1A2O94788 518 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ATP5BP06576 529 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 CNR2P34972 360 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 SLC12A1Q13621 1099 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 MAP7D1Q3KQU3 841 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PRR23BQ6ZRT6 265 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PGBD3Q8N328 593 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ATG4AQ8WYN0 398 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 ZYG11BQ9C0D3 744 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 MRPL47Q9HD33 250 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PRSS16Q9NQE7 514 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 PCSK1NQ9UHG2 260 aa9.55□□□□□ -0.88
BRCA1-219ENST00000491747 MBD1Q9UIS9 605 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
BRCA1-219ENST00000491747 WDR87Q6ZQQ6 2873 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 ZFHX2Q9C0A1 2572 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-219ENST00000491747 A8MUI8 341 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 SNAP91O60641 907 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 RHOCP08134 193 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 ABHD2P08910 425 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 VAV1P15498 845 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 TAC1P20366 129 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 GLDCP23378 1020 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 MIPP30301 263 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 ALDH3A1P30838 453 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 OR1E1P30953 314 aa9.54□□□□□ -0.88
BRCA1-219ENST00000491747 HOXD11P31277 338 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms