RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 INSM1Q01101 510 aaPredicted RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 IQCB1Q15051 598 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 TPRG1LQ5T0D9 272 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 RFX8Q6ZV50 586 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 VPS36Q86VN1 386 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 ZNF548Q8NEK5 533 aaPredicted RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 RFFLQ8WZ73 363 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 CENPTQ96BT3 561 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 ZNF653Q96CK0 615 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 APOLD1Q96LR9 279 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 EIF3CQ99613 913 aaKnown RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 FUCA2Q9BTY2 467 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 WRAP53Q9BUR4 548 aaKnown RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 DUSP23Q9BVJ7 150 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 C1QTNF7Q9BXJ2 289 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 CPEB1Q9BZB8 566 aaKnown RBP11.03□□□□□ -0.64
UBA1-209ENST00000490869 TRIM7Q9C029 511 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 SLC39A8Q9C0K1 460 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 DKK3Q9UBP4 350 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 CLCA2Q9UQC9 943 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
UBA1-209ENST00000490869 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 K7ESM1 405 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 PRPSAP2O60256 369 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 PRAMEF11O60813 436 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 NEBLO76041 1014 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 SKILP12757 684 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 MYF5P13349 255 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 JUNDP17535 347 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 ERCC2P18074 760 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 MIPP30301 263 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 IGFALSP35858 605 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
UBA1-209ENST00000490869 SUOXP51687 545 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 THOP1P52888 689 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 ELP6Q0PNE2 266 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 EIF2B5Q13144 721 aaKnown RBP11.02□□□□□ -0.65
UBA1-209ENST00000490869 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 GRM3Q14832 879 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 NR1I3Q14994 352 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 COL28A1Q2UY09 1125 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 TMEM52BQ4KMG9 183 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 PPP6R3Q5H9R7 873 aaPredicted RBP11.02□□□□□ -0.65
UBA1-209ENST00000490869 CFAP58Q5T655 872 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 CACTIN-AS1Q8N1I8 211 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 TP53I13Q8NBR0 393 aaPredicted RBP11.02□□□□□ -0.65
UBA1-209ENST00000490869 TRIM11Q96F44 468 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 EDEM3Q9BZQ6 932 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 NRSN2Q9GZP1 204 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 SUV39H2Q9H5I1 410 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 MBNL1Q9NR56 388 aaKnown RBP11.02□□□□□ -0.65
UBA1-209ENST00000490869 EVA1BQ9NVM1 165 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 AK5Q9Y6K8 562 aa11.02□□□□□ -0.65
UBA1-209ENST00000490869 WDFY3Q8IZQ1 3526 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 LY6G6EA0A0G2JKS1 128 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 TSPAN11A1L157 253 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 SYCE3A1L190 88 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 DFFAO00273 331 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 AQP9O43315 295 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 LRCH4O75427 683 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 PALMO75781 387 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 MT-CO3P00414 261 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 MYBL1P10243 752 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 RGRP47804 291 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 YPEL5P62699 121 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 TPM4P67936 248 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 UGP2Q16851 508 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 FIGNQ5HY92 759 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 AFMIDQ63HM1 303 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 ZCCHC8Q6NZY4 707 aaKnown RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 CYP4V2Q6ZWL3 525 aaPredicted RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 PSTKQ8IV42 348 aaKnown RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 ARHGAP12Q8IWW6 846 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 RBFAQ8N0V3 343 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 NPWQ8N729 165 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 DCBLD1Q8N8Z6 715 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 FAM181AQ8N9Y4 354 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 HCAR2Q8TDS4 363 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 LMX1AQ8TE12 382 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 BTN2A2Q8WVV5 523 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 ZNF641Q96N77 438 aaPredicted RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 SP110Q9HB58 689 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 USP29Q9HBJ7 922 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 SCUBE2Q9NQ36 999 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 SPASTQ9UBP0 616 aa11.01□□□□□ -0.65
UBA1-209ENST00000490869 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
UBA1-209ENST00000490869 COQ6Q9Y2Z9 468 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms