RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 C2orf27AQ580R0 203 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 CFAP58Q5T655 872 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 C9orf64Q5T6V5 341 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 ZNF687Q8N1G0 1237 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 TAB3Q8N5C8 712 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 IPMKQ8NFU5 416 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SPATA22Q8NHS9 363 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 PRCCQ92733 491 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 PPP1R16AQ96I34 528 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 MRGPRX2Q96LB1 330 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 UHRF1Q96T88 793 aaPredicted RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 GORASP1Q9BQQ3 440 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 TDRD1Q9BXT4 1180 aaKnown RBP13.38□□□□□ -0.27
SNX12-205ENST00000490561 ZDHHC6Q9H6R6 413 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 ANKZF1Q9H8Y5 726 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 MMP17Q9ULZ9 603 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
SNX12-205ENST00000490561 LOC285095A0A1B0GVY8 99 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 FAM170BA6NMN3 283 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 EIF3HO15372 352 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX12-205ENST00000490561 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 DCXO43602 365 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 NDST3O95803 873 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ADH1BP00325 375 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 FGF1P05230 155 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 HLA-EP13747 358 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 HOXB2P14652 356 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 ADRA1AP35348 466 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 SUOXP51687 545 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 PLTPP55058 493 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ARL4CP56559 192 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 POLR2LP62875 67 aaKnown RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 CDH17Q12864 832 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 BRAT1Q6PJG6 821 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 PDIK1LQ8N165 341 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ZCCHC9Q8N567 271 aaKnown RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX12-205ENST00000490561 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 TXNDC5Q8NBS9 432 aaKnown RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 RPLP0P6Q8NHW5 317 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 IFT81Q8WYA0 676 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 EDAQ92838 391 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ACOX2Q99424 681 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 LMAN1LQ9HAT1 526 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 ARNT2Q9HBZ2 717 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 PRSS16Q9NQE7 514 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 UBP1Q9NZI7 540 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
SNX12-205ENST00000490561 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX12-205ENST00000490561 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
SNX12-205ENST00000490561 TSPAN11A1L157 253 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 PGLSO95336 258 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 CPP00450 1065 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ALADP13716 330 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 CD72P21854 359 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 RPS9P46781 194 aaKnown RBP13.36□□□□□ -0.27
SNX12-205ENST00000490561 GRIA4P48058 902 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 TERF1P54274 439 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ZBTB16Q05516 673 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 TRAF2Q12933 501 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 CBLBQ13191 982 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 LAMB3Q13751 1172 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 PCSK7Q16549 785 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ZNF805Q5CZA5 627 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ANKRD22Q5VYY1 191 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
SNX12-205ENST00000490561 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 DNAAF3Q8N9W5 541 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 CHST14Q8NCH0 376 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 PJA1Q8NG27 643 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 OR6K2Q8NGY2 324 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 GRIN3AQ8TCU5 1115 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 CLDN23Q96B33 292 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 ECHDC3Q96DC8 303 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 TRIB3Q96RU7 358 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 FMO2Q99518 471 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 RSPH9Q9H1X1 276 aaPredicted RBP13.36□□□□□ -0.27
SNX12-205ENST00000490561 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
SNX12-205ENST00000490561 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms