RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RFPL3O75679 317 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 PIAS2O75928 621 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 CSF2P04141 144 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 UGT2B4P06133 528 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 NME1P15531 152 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 PSMA2P25787 234 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 MIPP30301 263 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 PCK1P35558 622 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 RABIFP47224 123 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF135P52742 658 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 DNAJC3Q13217 504 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ACAP1Q15027 740 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ASIC2Q16515 512 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 TMEM52BQ4KMG9 183 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ERMARDQ5T6L9 678 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 GDPD4Q6W3E5 623 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 LEKR1Q6ZMV7 388 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 DNAAF5Q86Y56 855 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 MARCH9Q86YJ5 346 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 OR6K2Q8NGY2 324 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 OR4C6Q8NH72 309 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 GDAP1L1Q96MZ0 367 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF641Q96N77 438 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 KLHL32Q96NJ5 620 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 NCAPGQ9BPX3 1015 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 SLC39A8Q9C0K1 460 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 ZDHHC6Q9H6R6 413 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 CBX8Q9HC52 389 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 FZD3Q9NPG1 666 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 UCKL1Q9NWZ5 548 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 KLF15Q9UIH9 416 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 AP4E1Q9UPM8 1137 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 CSNK1G3Q9Y6M4 447 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 LY6G6EA0A0G2JKS1 128 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TMCO5BA8MYB1 307 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 J3KR12 359 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TOR1BO14657 336 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 SCAMP1O15126 338 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 INSIG1O15503 277 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 CREB3O43889 395 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 BUB1BO60566 1050 aaPredicted RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 LRCH4O75427 683 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 MYBL1P10243 752 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 CKMT1AP12532 417 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TPI1P60174 286 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 E2F1Q01094 437 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 NSUN2Q08J23 767 aaKnown RBP eCLIP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 EIF2B5Q13144 721 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 SGCGQ13326 291 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 DPYSQ14117 519 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 GRM3Q14832 879 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 RTP5Q14D33 572 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 AGERQ15109 404 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TPRG1LQ5T0D9 272 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 RFX8Q6ZV50 586 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TTC7BQ86TV6 843 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 DCBLD1Q8N8Z6 715 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 ECHDC3Q96DC8 303 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TBATAQ96M53 351 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 TUBGCP5Q96RT8 1024 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 KCTD15Q96SI1 283 aaPredicted RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 SNRNP25Q9BV90 132 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 SUV39H2Q9H5I1 410 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 CAAP1Q9H8G2 361 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 GPATCH2LQ9NWQ4 482 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 CWC15Q9P013 229 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 CNOT8Q9UFF9 292 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 GGT7Q9UJ14 662 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 NENFQ9UMX5 172 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 ITM2BQ9Y287 266 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 GPSM3Q9Y4H4 160 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 BZW2Q9Y6E2 419 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 U3KQA8 63 aa9.84□□□□□ -0.83
TMEM39A-210ENST00000490099 A0A087WV48 116 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 CFAP69A5D8W1 941 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 FAM149AA5PLN7 773 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NEMP2A6NFY4 417 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 K7ESM1 405 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 FPGTO14772 594 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 TPP1O14773 563 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 SDC3O75056 442 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 RNF8O76064 485 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 IGSF6O95976 241 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 PEX11BO96011 259 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 SKILP12757 684 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 ERCC2P18074 760 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 ITIH2P19823 946 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 IL1R2P27930 398 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 HNRNPH3P31942 346 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 RGRP47804 291 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 PAPOLAP51003 745 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 RHOAP61586 193 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 HNRNPKP61978 463 aaKnown RBP eCLIP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 YPEL5P62699 121 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 FANCCQ00597 558 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms