RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PNPOQ9NVS9 261 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SYBUQ9NX95 663 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 KLHL42Q9P2K6 505 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TNFRSF10DQ9UBN6 386 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PCSK1NQ9UHG2 260 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PACSIN3Q9UKS6 424 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 VPS4AQ9UN37 437 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CDY2AQ9Y6F7 541 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CDY1Q9Y6F8 540 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ARPC4-TTLL3A0A0A6YYG9 625 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 C9IYK1 514 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 DLGAP1O14490 977 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SOCS2O14508 198 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PDPK1O15530 556 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GAS2O43903 313 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GRIN3BO60391 1043 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TADA2AO75478 443 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 LYPLA1O75608 230 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SEC24DO94855 1032 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CSPG5O95196 566 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 IL18RAPO95256 599 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GCNT3O95395 438 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PTTG1O95997 202 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GSRP00390 522 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 IFNB1P01574 187 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 RPLP1P05386 114 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CELA3AP09093 270 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 FGF3P11487 239 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 BMP4P12644 408 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 BMP1P13497 986 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP11B1P15538 503 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GSTM2P28161 218 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GRK3P35626 688 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CAPGP40121 348 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ELK3P41970 407 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 QARSP47897 775 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ALDH7A1P49419 539 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SERPINB9P50453 376 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CLCNKBP51801 687 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ADCY7P51828 1080 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CTSWP56202 376 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GJA9P57773 515 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TAS2R40P59535 323 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ABCE1P61221 599 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 MRPS15P82914 257 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TNK2Q07912 1038 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 BNIP2Q12982 314 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 LAMC2Q13753 1193 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 COG2Q14746 738 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 EPC2Q52LR7 807 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ESCO2Q56NI9 601 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 YIF1BQ5BJH7 314 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 MTX3Q5HYI7 312 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SNAP47Q5SQN1 464 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 LRRC38Q5VT99 294 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 AGAP6Q5VW22 663 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 IER5Q5VY09 327 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ANKRD22Q5VYY1 191 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 HMBOX1Q6NT76 420 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ZCCHC23Q6ZST2 131 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 DGLUCYQ7Z3D6 616 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM46Q7Z4K8 759 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PODNQ7Z5L7 613 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SLCO6A1Q86UG4 719 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CATSPER3Q86XQ3 398 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 IGDCC3Q8IVU1 814 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ARHGEF19Q8IW93 802 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 IFNL2Q8IZJ0 200 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 MCOLN2Q8IZK6 566 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 DHRSXQ8N5I4 330 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 CNTD1Q8N815 330 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GALNT11Q8NCW6 608 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 BPIFB6Q8NFQ5 453 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 OR10Z1Q8NGY1 313 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 OR6F1Q8NGZ6 308 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC35B2Q8TB61 432 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PHF10Q8WUB8 498 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF296Q8WUU4 475 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 STON2Q8WXE9 905 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 GJA10Q969M2 543 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SLCO4A1Q96BD0 722 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 OMA1Q96E52 524 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 REXO5Q96IC2 774 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 AGAP4Q96P64 663 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SLITRK1Q96PX8 696 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 ZIC5Q96T25 663 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 EYA3Q99504 573 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 SORT1Q99523 831 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 C9orf16Q9BUW7 83 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 RUSC1Q9BVN2 902 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TARS2Q9BW92 718 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM117Q9H0C3 514 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 KCNN2Q9H2S1 579 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 PLEKHA5Q9HAU0 1116 aa4.81□□□□□ -1.64
SNRNP40-206ENST00000489853 RPRD1BQ9NQG5 326 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms