RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 TDRD1Q9BXT4 1180 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 MRM3Q9HC36 420 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 TRPV5Q9NQA5 729 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 ZC3H7BQ9UGR2 993 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SPTBN5Q9NRC6 3674 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 C2CD4DB7Z1M9 353 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SOCS5O75159 536 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 NDST3O95803 873 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 DLDP09622 509 aaKnown RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 FOSL2P15408 326 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 CA4P22748 312 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SSTR1P30872 391 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SLC6A11P48066 632 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SNRPD1P62314 119 aaKnown RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 ZNF844Q08AG5 666 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 MSLNQ13421 630 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 MTM1Q13496 603 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SMAD2Q15796 467 aaKnown RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 PCSK7Q16549 785 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 UNC5AQ6ZN44 842 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 C3orf62Q6ZUJ4 267 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 Q7L0L9 218 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 TERB1Q8NA31 727 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 ST13P5Q8NFI4 369 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 OR2AP1Q8NGE2 309 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 HLA-CQ95604 372 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 CHFRQ96EP1 664 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 IFT43Q96FT9 208 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 MYO19Q96H55 970 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 RPL10LQ96L21 214 aaKnown RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 KIFC1Q9BW19 673 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 PHF7Q9BWX1 381 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 VPS37BQ9H9H4 285 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 PPCSQ9HAB8 311 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-205ENST00000489656 PLAC1Q9HBJ0 212 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 ELOVL2Q9NXB9 296 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 FAM53CQ9NYF3 392 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 GTSE1Q9NYZ3 720 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SAMD15Q9P1V8 674 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 FETUBQ9UGM5 382 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 RAI2Q9Y5P3 530 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 XIRP2A4UGR9 3374 aa14.3□□□□□ -0.12
VPS26A-205ENST00000489656 OPA1O60313 960 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 USP1O94782 785 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 SHBGP04278 402 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 IVLP07476 585 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 ALADP13716 330 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 NNMTP40261 264 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 GPS2Q13227 327 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 GRM3Q14832 879 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 DLG2Q15700 870 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 CCDC85BQ15834 202 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-205ENST00000489656 PTPRNQ16849 979 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 LEXMQ3ZCV2 418 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 PCID2Q5JVF3 399 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 SIRPB2Q5JXA9 342 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 SPANXN3Q5MJ09 141 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 CERCAMQ5T4B2 595 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 ATXN7L2Q5T6C5 722 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-205ENST00000489656 ZNF449Q6P9G9 518 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 TMEM135Q86UB9 458 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 SUGP1Q8IWZ8 645 aaKnown RBP14.29□□□□□ -0.12
VPS26A-205ENST00000489656 GSDMBQ8TAX9 411 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 FRS2Q8WU20 508 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
VPS26A-205ENST00000489656 ACSS3Q9H6R3 686 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
VPS26A-205ENST00000489656 PRKAG3Q9UGI9 489 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 SLCO3A1Q9UIG8 710 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 MAD1L1Q9Y6D9 718 aa14.29□□□□□ -0.12
VPS26A-205ENST00000489656 TCRBV9S1A1TA0A576 114 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 WASH3PC4AMC7 463 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 HTRA2O43464 458 aaPredicted RBP14.28□□□□□ -0.12
VPS26A-205ENST00000489656 FZD6O60353 706 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 PRLP01236 227 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 C1QAP02745 245 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 POLBP06746 335 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 ADRA1DP25100 572 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 STX2P32856 288 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CHRNA4P43681 627 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 RPL26P61254 145 aaKnown RBP14.28□□□□□ -0.12
VPS26A-205ENST00000489656 CRADDP78560 199 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 KDSRQ06136 332 aa14.28□□□□□ -0.12
VPS26A-205ENST00000489656 IFFO1Q0D2I5 559 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms