RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZRANB2O95218 330 aaKnown RBP eCLIP17.54■□□□□ 0.4
MDC1-206ENST00000489540 PIGNO95427 931 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 TIMP2P16035 220 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 XPAP23025 273 aaPredicted RBP17.54■□□□□ 0.4
MDC1-206ENST00000489540 CD38P28907 300 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 SERPINA4P29622 427 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 MMP13P45452 471 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 RGRP47804 291 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 C21orf59P57076 290 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 GBE1Q04446 702 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 BCL2L1Q07817 233 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 STAT4Q14765 748 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 RALGPS1Q5JS13 557 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 CFAP58Q5T655 872 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 CAMK1DQ8IU85 385 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 KATNAL2Q8IYT4 538 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 RCOR2Q8IZ40 523 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 TEX26Q8N6G2 289 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 MGME1Q9BQP7 344 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 GOLPH3Q9H4A6 298 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 DNAAF2Q9NVR5 837 aaKnown RBP17.54■□□□□ 0.4
MDC1-206ENST00000489540 DTLQ9NZJ0 730 aa17.54■□□□□ 0.4
MDC1-206ENST00000489540 ZFR2Q9UPR6 939 aaKnown RBP17.54■□□□□ 0.4
MDC1-206ENST00000489540 CEP250Q9BV73 2442 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 FRYLO94915 3013 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 TSPAN11A1L157 253 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 AREL1O15033 823 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 SLC31A1O15431 190 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 CER1O95813 267 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 ABL2P42684 1182 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 POLR2LP62875 67 aaKnown RBP17.53■□□□□ 0.4
MDC1-206ENST00000489540 BNC1Q01954 994 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 OVGP1Q12889 678 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 SLC10A2Q12908 348 aaPredicted RBP17.53■□□□□ 0.4
MDC1-206ENST00000489540 SLC14A1Q13336 389 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 TFDP2Q14188 446 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 TAZQ16635 292 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 KIF19Q2TAC6 998 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 UAP1L1Q3KQV9 507 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 TMEM259Q4ZIN3 620 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 MFSD7Q6UXD7 560 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 DGLUCYQ7Z3D6 616 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 IQCHQ86VS3 1027 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 RFX6Q8HWS3 928 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 PLD5Q8N7P1 536 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 MFSD2AQ8NA29 543 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 CCNYQ8ND76 341 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 MAML1Q92585 1016 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 NUDCD1Q96RS6 583 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 AMACRQ9UHK6 382 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 WDR87Q6ZQQ6 2873 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
MDC1-206ENST00000489540 TNRC6BQ9UPQ9 1833 aaKnown RBP17.52■□□□□ 0.4
MDC1-206ENST00000489540 A0A1W2PQ67 120 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 A0A1W2PR77 199 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 DCDC2BA2VCK2 349 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 DFNA5O60443 496 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 MAGEC1O60732 1142 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 CR2P20023 1033 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 CES1P23141 567 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 AKT2P31751 481 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 CDKN2BP42772 138 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 ELP6Q0PNE2 266 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 SGCGQ13326 291 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 UGP2Q16851 508 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 HLA-BQ31612 363 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 SEL1L3Q68CR1 1132 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 ERAP2Q6P179 960 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 BZW1Q7L1Q6 419 aaKnown RBP17.52■□□□□ 0.4
MDC1-206ENST00000489540 EXD1Q8NHP7 514 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 ASB12Q8WXK4 309 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 HDAC11Q96DB2 347 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 RBM41Q96IZ5 413 aaKnown RBP17.52■□□□□ 0.4
MDC1-206ENST00000489540 DESI2Q9BSY9 194 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 C1QTNF2Q9BXJ5 285 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 SLC17A9Q9BYT1 436 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 BRD8Q9H0E9 1235 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 GAREM1Q9H706 876 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 SCUBE2Q9NQ36 999 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 HEY1Q9Y5J3 304 aa17.52■□□□□ 0.4
MDC1-206ENST00000489540 UPK3BL1B0FP48 263 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 UPK3BL2E5RIL1 263 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 TLR4O00206 839 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 WNT9AO14904 365 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 ARHGAP6O43182 974 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 MAP3K6O95382 1288 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 WNT1P04628 370 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 CCNB1P14635 433 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 HNRNPA2B1P22626 353 aaKnown RBP17.51■□□□□ 0.39
MDC1-206ENST00000489540 CTSKP43235 329 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 NR2C2P49116 596 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 PDK1Q15118 436 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 TFDP3Q5H9I0 405 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 SPOCD1Q6ZMY3 1216 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 CCDC13Q8IYE1 715 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 PGBD5Q8N414 524 aa17.51■□□□□ 0.39
MDC1-206ENST00000489540 PAF1Q8N7H5 531 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms