RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MAGEH1Q9H213 219 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 NLRC4Q9NPP4 1024 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 MBNL1Q9NR56 388 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 FAM207AQ9NSI2 230 aaPredicted RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 ANO10Q9NW15 660 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 LHX3Q9UBR4 397 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 CSNK1G3Q9Y6M4 447 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 TEP1Q99973 2627 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 EME2A4GXA9 379 aaPredicted RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 KRIT1O00522 736 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 FPGTO14772 594 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 CCP110O43303 1012 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 AQP9O43315 295 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 KDELR3O43731 214 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 RAMP2O60895 175 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 ALPPL2P10696 532 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 TIMP2P16035 220 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 SKOR1P84550 965 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 OGDHQ02218 1023 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 C1orf61Q13536 156 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 CLEC16AQ2KHT3 1053 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 ISXQ2M1V0 245 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 MON1BQ7L1V2 547 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 APTXQ7Z2E3 356 aaKnown RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 EFL1Q7Z2Z2 1120 aaKnown RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 GPR155Q7Z3F1 870 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 SLC35F3Q8IY50 421 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 RYBPQ8N488 228 aaPredicted RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 MSANTD4Q8NCY6 345 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 ANKRD20A12PQ8NF67 263 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 ENOX1Q8TC92 643 aaKnown RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 LMX1AQ8TE12 382 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
ACTN4-206ENST00000489451 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 HMCESQ96FZ2 354 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 DEPDC7Q96QD5 511 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 ENTPD2Q9Y5L3 495 aa11.91□□□□□ -0.5
ACTN4-206ENST00000489451 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 NEMP2A6NFY4 417 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 TPP1O14773 563 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 SLC28A2O43868 658 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 MMP20O60882 483 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 POP4O95707 220 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 ETFBP38117 255 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 LSSP48449 732 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 SNRPD1P62314 119 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 RPL7AP62424 266 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 CXADRP78310 365 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 POLD3Q15054 466 aaPredicted RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 CYTH1Q15438 398 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 STX1AQ16623 288 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 RBM43Q6ZSC3 357 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 PHACTR4Q8IZ21 702 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 C3orf20Q8ND61 904 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 MAPK15Q8TD08 544 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 EXOC2Q96KP1 924 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 LGMNQ99538 433 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 EPAS1Q99814 870 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 TTYH3Q9C0H2 523 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 HSD3B7Q9H2F3 369 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 RETREG1Q9H6L5 497 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 POLR1BQ9H9Y6 1135 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 USP29Q9HBJ7 922 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 CPNE5Q9HCH3 593 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 APOBEC3BQ9UH17 382 aaKnown RBP11.9□□□□□ -0.5
ACTN4-206ENST00000489451 RABGEF1Q9UJ41 708 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 SALL4Q9UJQ4 1053 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 SATB2Q9UPW6 733 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 COQ6Q9Y2Z9 468 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 MFHAS1Q9Y4C4 1052 aa11.9□□□□□ -0.5
ACTN4-206ENST00000489451 SCN8AQ9UQD0 1980 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 CPED1A4D0V7 1026 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 WASH4PA8MWX3 477 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 B8ZZF3 427 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 H3BM21 787 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 BUB1O43683 1085 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 KRT38O76015 456 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 PIGNO95427 931 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 KRT3P12035 628 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 GPD1P21695 349 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 RGRP47804 291 aa11.89□□□□□ -0.51
ACTN4-206ENST00000489451 DUSP3P51452 185 aaPredicted RBP11.89□□□□□ -0.51
ACTN4-206ENST00000489451 GEMIN4P57678 1058 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms