RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CHP1Q99653 195 aa13.68□□□□□ -0.22
LMO4-203ENST00000489303 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
LMO4-203ENST00000489303 CPEB1Q9BZB8 566 aaKnown RBP13.68□□□□□ -0.22
LMO4-203ENST00000489303 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
LMO4-203ENST00000489303 RCOR3Q9P2K3 495 aaPredicted RBP13.68□□□□□ -0.22
LMO4-203ENST00000489303 IPO11Q9UI26 975 aaKnown RBP13.68□□□□□ -0.22
LMO4-203ENST00000489303 LAMA5O15230 3695 aa13.68□□□□□ -0.22
LMO4-203ENST00000489303 PTPRBP23467 1997 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 RNF103O00237 685 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 WNT9AO14904 365 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
LMO4-203ENST00000489303 TCF4P15884 667 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 PRLRP16471 622 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 SUOXP51687 545 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 NXPH1P58417 271 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 IL9RQ01113 521 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 PDK2Q15119 407 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 TMCO4Q5TGY1 634 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ARHGAP12Q8IWW6 846 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 RHOT2Q8IXI1 618 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 NPWQ8N729 165 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 NETO2Q8NC67 525 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 KCTD6Q8NC69 237 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 BAHD1Q8TBE0 780 aaPredicted RBP13.67□□□□□ -0.22
LMO4-203ENST00000489303 HCAR2Q8TDS4 363 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 RHBDD1Q8TEB9 315 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ADAMTS14Q8WXS8 1223 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 EXOC2Q96KP1 924 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ZNF599Q96NL3 588 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 CDC6Q99741 560 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ERVMER34-1Q9H9K5 563 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 DKK3Q9UBP4 350 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 LHX3Q9UBR4 397 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 SEPT3Q9UH03 358 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 PKD1L2Q7Z442 2459 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
LMO4-203ENST00000489303 ZFYVE26Q68DK2 2539 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 A0A1B0GTQ1 180 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 TMEM8BA6NDV4 472 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 TRIM16O95361 564 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ITGAVP06756 1048 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 MAN1A1P33908 653 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 GRK6P43250 576 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 CSNK1DP48730 415 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 TBX2Q13207 712 aaPredicted RBP13.66□□□□□ -0.22
LMO4-203ENST00000489303 ZNF235Q14590 738 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 MESDQ14696 234 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 LBRQ14739 615 aaKnown RBP13.66□□□□□ -0.22
LMO4-203ENST00000489303 SEL1L3Q68CR1 1132 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 SRLQ86TD4 932 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ATPAF2Q8N5M1 289 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 SLC35G2Q8TBE7 412 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 MDM1Q8TC05 714 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 CXorf40AQ8TE69 158 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ZNF641Q96N77 438 aaPredicted RBP13.66□□□□□ -0.22
LMO4-203ENST00000489303 MYOCQ99972 504 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 C1QTNF7Q9BXJ2 289 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 CALN1Q9BXU9 219 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 INTUQ9ULD6 942 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 ZFR2Q9UPR6 939 aaKnown RBP13.66□□□□□ -0.22
LMO4-203ENST00000489303 HS3ST3A1Q9Y663 406 aa13.66□□□□□ -0.22
LMO4-203ENST00000489303 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 PAK4O96013 591 aaPredicted RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 THEGLP0DJG4 465 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 SERPINA4P29622 427 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 HSPA9P38646 679 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 ABL2P42684 1182 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 NSUN2Q08J23 767 aaKnown RBP eCLIP13.65□□□□□ -0.22
LMO4-203ENST00000489303 TMEM259Q4ZIN3 620 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 ODF2Q5BJF6 829 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 ERAP2Q6P179 960 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 BRAT1Q6PJG6 821 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 DCP2Q8IU60 420 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 LRRC49Q8IUZ0 686 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 TMEM145Q8NBT3 493 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 TSEN2Q8NCE0 465 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 ZNF670Q9BS34 389 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 FZD3Q9NPG1 666 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 HAUS2Q9NVX0 235 aa13.65□□□□□ -0.22
LMO4-203ENST00000489303 APOBEC2Q9Y235 224 aaKnown RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
LMO4-203ENST00000489303 DSPP15924 2871 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms