RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 BIRC5O15392 142 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 EPORP19235 508 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 PBX1P40424 430 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 RHBDL3P58872 404 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 TOP3AQ13472 1001 aaPredicted RBP17.75■□□□□ 0.43
NPHP4-209ENST00000489180 MTX3Q5HYI7 312 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 PACS1Q6VY07 963 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 EIF3MQ7L2H7 374 aaKnown RBP17.75■□□□□ 0.43
NPHP4-209ENST00000489180 KRT77Q7Z794 578 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 LRRC4CQ9HCJ2 640 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 SEC24AO95486 1093 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 ZNF544Q6NX49 715 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 ZNF549Q6P9A3 640 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 KIAA0408Q6ZU52 694 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 ZNF671Q8TAW3 534 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 GINS4Q9BRT9 223 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 TNFSF13BQ9Y275 285 aa17.75■□□□□ 0.43
NPHP4-209ENST00000489180 UMODL1Q5DID0 1318 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 KPNA6O60684 536 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 CYP4B1P13584 511 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 CDC42P60953 191 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 DEFB132Q7Z7B7 95 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 HOMEZQ8IX15 550 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 CLPTM1LQ96KA5 538 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 EXOC2Q96KP1 924 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 ZNF670Q9BS34 389 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 OSBPL6Q9BZF3 934 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 ZCCHC2Q9C0B9 1178 aaKnown RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 RAD21L1Q9H4I0 556 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 TMPRSS4Q9NRS4 437 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 TMEM216Q9P0N5 145 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 BTBD3Q9Y2F9 522 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 ERBB2P04626 1255 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 ARSHQ5FYA8 562 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 SDHAF4Q5VUM1 108 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 EMID1Q96A84 441 aaPredicted RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 RSL24D1Q9UHA3 163 aaKnown RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 R3HDM2Q9Y2K5 976 aaKnown RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 YDJCA8MPS7 323 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 LRATO95237 230 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 TSHRP16473 764 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 CCR4P51679 360 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 PFKPQ01813 784 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 TTC23Q5W5X9 447 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 VPS35Q96QK1 796 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 SNX6Q9UNH7 406 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 HOXB8P17481 243 aaPredicted RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
NPHP4-209ENST00000489180 CYP2A13Q16696 494 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 PTPRNQ16849 979 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 GPR156Q8NFN8 814 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 TM6SF2Q9BZW4 377 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 ABHD16BQ9H3Z7 469 aa17.74■□□□□ 0.43
NPHP4-209ENST00000489180 SERPINA4P29622 427 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 PPP1R26Q5T8A7 1209 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 USP45Q70EL2 814 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 POC5Q8NA72 575 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 LPPQ93052 612 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 COL26A1Q96A83 441 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 CDCA5Q96FF9 252 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 MLPHQ9BV36 600 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 KLHL31Q9H511 634 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 WDR55Q9H6Y2 383 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 GNPTGQ9UJJ9 305 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 TCRBV7S2A1N4TA0A589 114 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ANKDD1BA6NHY2 528 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 FNDC3BQ53EP0 1204 aaKnown RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 GK5Q6ZS86 529 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 SLC9A9Q8IVB4 645 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ARRDC4Q8NCT1 418 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 OGDHLQ9ULD0 1010 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 IFNGR2P38484 337 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 SPIRE1Q08AE8 756 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ILF2Q12905 390 aaKnown RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ACMSDQ8TDX5 336 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 STARD8Q92502 1023 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 TRIM63Q969Q1 353 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 DYTNA2CJ06 578 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 TMEM191CA6NGB0 347 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 CDH13P55290 713 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 SEMA5AQ13591 1074 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 MKL1Q969V6 931 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 DHRS12A0PJE2 317 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 MAFO75444 373 aaPredicted RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 MLYCDO95822 493 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 SLC5A9Q2M3M2 681 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 GPRIN3Q6ZVF9 776 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms