RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TMBIM4Q9HC24 238 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PPANQ9NQ55 473 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 HPS4Q9NQG7 708 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 SLC24A2Q9UI40 661 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 FBXO10Q9UK96 956 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SOX13Q9UN79 622 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SLC27A6Q9Y2P4 619 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 RAI2Q9Y5P3 530 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 MYO7AQ13402 2215 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 LOC285095A0A1B0GVY8 99 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 HEATR9A2RTY3 570 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TRIM24O15164 1050 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 BNIP3LO60238 219 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 USP1O94782 785 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 SYF2O95926 243 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 INHBAP08476 426 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 DLDP09622 509 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 ATXN1LP0C7T5 689 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 PAMP19021 973 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ADRA1DP25100 572 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 SERPINA4P29622 427 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 MSH2P43246 934 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 CSNK1DP48730 415 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 EPHB1P54762 984 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 RAD51Q06609 339 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 BCL2L1Q07817 233 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 HTR4Q13639 388 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 GALNT3Q14435 633 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 EFTUD2Q15029 972 aaKnown RBP eCLIP10.11□□□□□ -0.79
USP11-211ENST00000489111 EIF4HQ15056 248 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 TMED2Q15363 201 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 CCDC85BQ15834 202 aaPredicted RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 SKIDA1Q1XH10 827 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ITPRIPL2Q3MIP1 535 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 KBTBD12Q3ZCT8 623 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ANKRD20A4Q4UJ75 823 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TTMPQ5BVD1 217 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 PKN3Q6P5Z2 889 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 NCEH1Q6PIU2 408 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 KIAA0907Q7Z7F0 614 aaPredicted RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 RASSF3Q86WH2 238 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ETFBKMTQ8IXQ9 262 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 LPCAT1Q8NF37 534 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 OR2AP1Q8NGE2 309 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 OR6K2Q8NGY2 324 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 FGF14Q92915 247 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ARL8AQ96BM9 186 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 MRRFQ96E11 262 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 PGM2Q96G03 612 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 MYO19Q96H55 970 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TRIB3Q96RU7 358 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 PAFAH2Q99487 392 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TRIM56Q9BRZ2 755 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 KIFC1Q9BW19 673 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 PLA2G2FQ9BZM2 168 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 UBE2ZQ9H832 354 aaPredicted RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 BRD9Q9H8M2 597 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 MRM3Q9HC36 420 aaKnown RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 FAM53CQ9NYF3 392 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 FETUBQ9UGM5 382 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 EVLQ9UI08 416 aaPredicted RBP10.11□□□□□ -0.79
USP11-211ENST00000489111 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ERVW-1Q9UQF0 538 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 CHKBQ9Y259 395 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 TCAF1Q9Y4C2 921 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 PCDHGC4Q9Y5F7 938 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 NUMBLQ9Y6R0 609 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 ATG2AQ2TAZ0 1938 aa10.11□□□□□ -0.79
USP11-211ENST00000489111 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 HELZP42694 1942 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 LAMA3Q16787 3333 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 CCDC78A2IDD5 438 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 FAM159BA6NKW6 160 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TIMM44O43615 452 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 SOCS5O75159 536 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 SRPRAP08240 638 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 CISD3P0C7P0 127 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 ALADP13716 330 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 FOSL2P15408 326 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 PRKCHP24723 683 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 EIF2DP41214 584 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 MGAT5Q09328 741 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TRAF2Q12933 501 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 NAB1Q13506 487 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 FRG1Q14331 258 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 IHHQ14623 411 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 DLG2Q15700 870 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 CARD16Q5EG05 197 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 DGKKQ5KSL6 1271 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 ARMC12Q5T9G4 340 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 KCTD16Q68DU8 428 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 ZNF449Q6P9G9 518 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 TRMT10BQ6PF06 316 aaKnown RBP10.1□□□□□ -0.79
USP11-211ENST00000489111 CES3Q6UWW8 571 aa10.1□□□□□ -0.79
USP11-211ENST00000489111 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms