RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 CA9Q16790 459 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 HADHQ16836 314 aaKnown RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 PARS2Q7L3T8 475 aaKnown RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 TTC7BQ86TV6 843 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 VOPP1Q96AW1 172 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 KCTD15Q96SI1 283 aaPredicted RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 NUP85Q9BW27 656 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 TRIM7Q9C029 511 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 SLC39A8Q9C0K1 460 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 GPATCH2LQ9NWQ4 482 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 CWC15Q9P013 229 aaKnown RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 NENFQ9UMX5 172 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 ZFR2Q9UPR6 939 aaKnown RBP12.52□□□□□ -0.41
SFXN5-219ENST00000488839 PCDHGA1Q9Y5H4 931 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
SFXN5-219ENST00000488839 KNL1Q8NG31 2342 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 ACACBO00763 2458 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 A6NNZ2 444 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 SMAPO00193 183 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 RNF103O00237 685 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 NEMP1O14524 444 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 FPGTO14772 594 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 PAK4O96013 591 aaPredicted RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 UGT2B4P06133 528 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 PROS1P07225 676 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 H2AFZP0C0S5 128 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 THEGLP0DJG4 465 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 RARAP10276 462 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 SERPINB6P35237 376 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 HSPA9P38646 679 aaKnown RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 RABIFP47224 123 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 SHBQ15464 509 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 LAYNQ6UX15 382 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 H2AFVQ71UI9 128 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
SFXN5-219ENST00000488839 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 ARHGAP12Q8IWW6 846 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 FAM71BQ8TC56 605 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 KLHL32Q96NJ5 620 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 SUV39H2Q9H5I1 410 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 GPR27Q9NS67 375 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 FTSJ1Q9UET6 329 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 ANAPC7Q9UJX3 599 aa12.51□□□□□ -0.41
SFXN5-219ENST00000488839 TPRP12270 2363 aaKnown RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 J3KR12 359 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 PALMO75781 387 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 IL1R2P27930 398 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 ABL2P42684 1182 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 PRSS12P56730 875 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 YPEL5P62699 121 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 POLR2LP62875 67 aaKnown RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 ILKQ13418 452 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 TMEM52BQ4KMG9 183 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 RALGPS1Q5JS13 557 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 ATXN7L2Q5T6C5 722 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 SEL1L3Q68CR1 1132 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 TMCO3Q6UWJ1 677 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 LEKR1Q6ZMV7 388 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 KANSL1Q7Z3B3 1105 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 OR6K2Q8NGY2 324 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 CTNNBL1Q8WYA6 563 aaPredicted RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 BMFQ96LC9 184 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 DEF6Q9H4E7 631 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 SP110Q9HB58 689 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 LHX3Q9UBR4 397 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 IPO11Q9UI26 975 aaKnown RBP12.5□□□□□ -0.41
SFXN5-219ENST00000488839 BTBD3Q9Y2F9 522 aa12.5□□□□□ -0.41
SFXN5-219ENST00000488839 TMEM131Q92545 1883 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 NEMP2A6NFY4 417 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 HYAL3O43820 417 aaPredicted RBP12.49□□□□□ -0.41
SFXN5-219ENST00000488839 TM7SF2O76062 418 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 PROSCO94903 275 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
SFXN5-219ENST00000488839 TMEM253P0C7T8 217 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 TIMP2P16035 220 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 PRLRP16471 622 aa12.49□□□□□ -0.41
SFXN5-219ENST00000488839 XPAP23025 273 aaPredicted RBP12.49□□□□□ -0.41
SFXN5-219ENST00000488839 NFKBIAP25963 317 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms