RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DEF6Q9H4E7 631 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 PCDH18Q9HCL0 1135 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 ETNK2Q9NVF9 386 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 DKK3Q9UBP4 350 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 MYO1FO00160 1098 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 AREL1O15033 823 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 MFAP3LO75121 409 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 PAK4O96013 591 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 TPM1P09493 284 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 GJC1P36383 396 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 RXRGP48443 463 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 BNIP3Q12983 259 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 SGCGQ13326 291 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 KRT81Q14533 505 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 SLC18A3Q16572 532 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 CCDC157Q569K6 752 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 TTC7BQ86TV6 843 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 SLC22A18ASQ8N1D0 253 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 EID2Q8N6I1 236 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 TSEN2Q8NCE0 465 aaKnown RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 CTNNBL1Q8WYA6 563 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 TMEM121BQ9BXQ6 578 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 CPEB1Q9BZB8 566 aaKnown RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 ABHD10Q9NUJ1 306 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 ZNHIT6Q9NWK9 470 aaKnown RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 CTTNBP2NLQ9P2B4 639 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 IPO11Q9UI26 975 aaKnown RBP17.95■□□□□ 0.46
ITGB1-215ENST00000488494 FREM2Q5SZK8 3169 aa17.95■□□□□ 0.46
ITGB1-215ENST00000488494 POM121BA6NF01 834 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 ITIH2P19823 946 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 XPAP23025 273 aaPredicted RBP17.94■□□□□ 0.46
ITGB1-215ENST00000488494 AMPD1P23109 780 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 IL10RBQ08334 325 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 TMCO4Q5TGY1 634 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 KDM7AQ6ZMT4 941 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 Q6ZSR6 202 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 KANSL1Q7Z3B3 1105 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 LZTR1Q8N653 840 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 GATA6Q92908 595 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 CNDP2Q96KP4 475 aaKnown RBP17.94■□□□□ 0.46
ITGB1-215ENST00000488494 KLF6Q99612 283 aaPredicted RBP17.94■□□□□ 0.46
ITGB1-215ENST00000488494 WRAP53Q9BUR4 548 aaKnown RBP17.94■□□□□ 0.46
ITGB1-215ENST00000488494 C1QTNF2Q9BXJ5 285 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 MSRB2Q9Y3D2 182 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 WDFY3Q8IZQ1 3526 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 CABIN1Q9Y6J0 2220 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 ZZEF1O43149 2961 aa17.94■□□□□ 0.46
ITGB1-215ENST00000488494 SSU72P8A0A1W2PR75 194 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 TSPAN11A1L157 253 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 FPGTO14772 594 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 AKR1B10O60218 316 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 DKK1O94907 266 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 TIMP2P16035 220 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 CDH6P55285 790 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 RFTN1Q14699 578 aaPredicted RBP17.93■□□□□ 0.46
ITGB1-215ENST00000488494 GRM3Q14832 879 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 ASTE1Q2TB18 679 aaPredicted RBP17.93■□□□□ 0.46
ITGB1-215ENST00000488494 CAMK1DQ8IU85 385 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 ATPAF2Q8N5M1 289 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 DENND6BQ8NEG7 585 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 CXorf40AQ8TE69 158 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 TSC1Q92574 1164 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 BMFQ96LC9 184 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 TUBGCP5Q96RT8 1024 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 ATP13A3Q9H7F0 1226 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 CAAP1Q9H8G2 361 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 GPR27Q9NS67 375 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 KLHL11Q9NVR0 708 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 UVRAGQ9P2Y5 699 aa17.93■□□□□ 0.46
ITGB1-215ENST00000488494 ENC1O14682 589 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 MUSKO15146 869 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 MMP20O60882 483 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 PROSCO94903 275 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 LDOC1O95751 146 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 PROS1P07225 676 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 CD48P09326 243 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 H2AFZP0C0S5 128 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 SERPINA4P29622 427 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 RABIFP47224 123 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 ADKP55263 362 aaKnown RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 HADHQ16836 314 aaKnown RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 BRAT1Q6PJG6 821 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 H2AFVQ71UI9 128 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 SRLQ86TD4 932 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 ZSWIM9Q86XI8 627 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 FAM174AQ8TBP5 190 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 ASB12Q8WXK4 309 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 ZNF641Q96N77 438 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 LENG8Q96PV6 779 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 SUV39H2Q9H5I1 410 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 PCDH12Q9NPG4 1184 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 SPTLC3Q9NUV7 552 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 UCKL1Q9NWZ5 548 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 RCOR3Q9P2K3 495 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-215ENST00000488494 SEPT3Q9UH03 358 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms