RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	UACA	Q9BZF9	1416 aa		4.96	□□□□□ -1.62
SRRM1-215	ENST00000488317	NCOA2	Q15596	1464 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CCDC18	Q5T9S5	1454 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	FRMD3	A2A2Y4	597 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SYNDIG1L	A6NDD5	238 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	MANSC4	A6NHS7	340 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317		F8W810	466 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	IFNL4	K9M1U5	179 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	P4HA2	O15460	535 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PRPF4	O43172	522 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PLOD3	O60568	738 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PAGE4	O60829	102 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	BEST1	O76090	585 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	IPO7	O95373	1038 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	TF	P02787	698 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	WNT1	P04628	370 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	RRM1	P23921	792 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	MCM3	P25205	808 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ACSL1	P33121	698 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	GARS	P41250	739 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PIP4K2A	P48426	406 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CLCN5	P51795	746 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	INHBC	P55103	352 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CDH8	P55286	799 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	HDAC4	P56524	1084 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	GHRHR	Q02643	423 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	TFF2	Q03403	129 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SLC18A2	Q05940	514 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	EPS8	Q12929	822 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CSTF3	Q12996	717 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ZSCAN23	Q3MJ62	389 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	STRIP1	Q5VSL9	837 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	LRRC8E	Q6NSJ5	796 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	HMBOX1	Q6NT76	420 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CHST9	Q7L1S5	443 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	TMC8	Q8IU68	726 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	DHX40	Q8IX18	779 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	DDIAS	Q8IXT1	998 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	TEX11	Q8IYF3	940 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ADGRF2	Q8IZF7	708 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CADM3	Q8N126	398 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317		Q8N1X5	172 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SLC25A41	Q8N5S1	370 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	LRRC57	Q8N9N7	239 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	BOLL	Q8N9W6	283 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SEMA6D	Q8NFY4	1073 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	OR4N2	Q8NGD1	307 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PABPC5	Q96DU9	382 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	CLMN	Q96JQ2	1002 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	YME1L1	Q96TA2	773 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	FAM118B	Q9BPY3	351 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SLF1	Q9BQI6	1058 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	STRA6	Q9BX79	667 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	WDR6	Q9NNW5	1121 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ASAH2	Q9NR71	780 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PDGFC	Q9NRA1	345 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	PLSCR4	Q9NRQ2	329 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	TMEM45A	Q9NWC5	275 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	KLHL13	Q9P2N7	655 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	MTMR6	Q9Y217	621 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	AAR2	Q9Y312	384 aa	Known RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ABCA10	Q8WWZ4	1543 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	KDM5B	Q9UGL1	1544 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	KAT6A	Q92794	2004 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	FMN1	Q68DA7	1419 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	FGD6	Q6ZV73	1430 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	FANCI	Q9NVI1	1328 aa		4.95	□□□□□ -1.62
SRRM1-215	ENST00000488317	SNAPC4	Q5SXM2	1469 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	TRBV5-7	A0A0A0MS05	114 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317		A0A1W2PQ09	198 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	C17orf102	A2RUQ5	167 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	CBY3	A6NI87	242 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	LINC01548	A6NM66	108 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	BTBD18	B2RXH4	712 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	SEC14L5	O43304	696 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	ATP2C2	O75185	946 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	PROP1	O75360	226 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	C1QL1	O75973	258 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	MT-CYB	P00156	380 aa	Predicted RBP	4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	BMP5	P22003	454 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	CDA	P32320	146 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	GPR12	P47775	334 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	TMPRSS3	P57727	454 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	CLDN2	P57739	230 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	CALD1	Q05682	793 aa	Known RBP	4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	NIPAL4	Q0D2K0	466 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	LRMP	Q12912	555 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	STK4	Q13043	487 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	FGFBP1	Q14512	234 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	COL28A1	Q2UY09	1125 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	MIDN	Q504T8	468 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	SERPINA11	Q86U17	422 aa		4.94	□□□□□ -1.62
SRRM1-215	ENST00000488317	TICAM1	Q8IUC6	712 aa		4.94	□□□□□ -1.62

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