RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 RPS21P63220 83 aaKnown RBP23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 GRM3Q14832 879 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 PAFAH1B3Q15102 231 aaKnown RBP23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 TMEM259Q4ZIN3 620 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 ODF2Q5BJF6 829 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 RAD9BQ6WBX8 426 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 TTC7BQ86TV6 843 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 PQLC3Q8N755 202 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 PAF1Q8N7H5 531 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 NSMCE1Q8WV22 266 aa23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 ARID1BQ8NFD5 2236 aaPredicted RBP23.94■■□□□ 1.42
RHBDD3-205ENST00000488106 TTC24A2A3L6 582 aaPredicted RBP23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 PEX11BO96011 259 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 CD59P13987 128 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 XPAP23025 273 aaPredicted RBP23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 SERPINA4P29622 427 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 SCNN1BP51168 640 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 HADHBP55084 474 aaKnown RBP23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 IL9RQ01113 521 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 STAT4Q14765 748 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 CAMK1DQ8IU85 385 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 RHOT1Q8IXI2 618 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 ACRBPQ8NEB7 543 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 FEM1CQ96JP0 617 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 PSKH2Q96QS6 385 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 TUBGCP5Q96RT8 1024 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 BAG1Q99933 345 aaPredicted RBP23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 SUV39H2Q9H5I1 410 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 ATP13A3Q9H7F0 1226 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 TM7SF3Q9NS93 570 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 IMPACTQ9P2X3 320 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 DKK3Q9UBP4 350 aa23.93■■□□□ 1.42
RHBDD3-205ENST00000488106 H0Y8X5 98 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 TSPAN6O43657 245 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 ITIH2P19823 946 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 HNRNPA2B1P22626 353 aaKnown RBP23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 AKT2P31751 481 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 GARSP41250 739 aaKnown RBP23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 CSNK1DP48730 415 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 RENBPP51606 427 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 GBE1Q04446 702 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 GALNT2Q10471 571 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 BBS5Q8N3I7 341 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 PGBD5Q8N414 524 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 MFSD2AQ8NA29 543 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 RNF157Q96PX1 679 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 REXO2Q9Y3B8 237 aaKnown RBP23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 SPEGQ15772 3267 aa23.92■■□□□ 1.42
RHBDD3-205ENST00000488106 GOLGA4Q13439 2230 aaKnown RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 LRP4O75096 1905 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 A0A0A6YYK5 440 aaPredicted RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 RCCD1A6NED2 376 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 IGLON5A6NGN9 336 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 C3orf70A6NLC5 250 aaPredicted RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 TLR4O00206 839 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 AREL1O15033 823 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 TIMP2P16035 220 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 CSRP1P21291 193 aaKnown RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 MMP13P45452 471 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 MAXP61244 160 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 BCL2L1Q07817 233 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 SLC14A1Q13336 389 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 FGL2Q14314 439 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 PRAMEF14Q5SWL7 426 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 LRRC38Q5VT99 294 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 NAXDQ8IW45 347 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 TMEM145Q8NBT3 493 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 LRRN4Q8WUT4 740 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 RNF25Q96BH1 459 aaPredicted RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 ZNF641Q96N77 438 aaPredicted RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 CAMK1GQ96NX5 476 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 WRAP53Q9BUR4 548 aaKnown RBP23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 SLC17A9Q9BYT1 436 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 SLC32A1Q9H598 525 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 GDF3Q9NR23 364 aa23.91■■□□□ 1.42
RHBDD3-205ENST00000488106 TSPAN11A1L157 253 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 GOLGA6L6A8MZA4 724 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 UPK3BL1B0FP48 263 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 UPK3BL2E5RIL1 263 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 SH3BP5O60239 455 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 PRKCGP05129 697 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 ZNF883P0CG24 379 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 HSPA9P38646 679 aaKnown RBP23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 CCT8P50990 548 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 CLDN2P57739 230 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 NXPH1P58417 271 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 AP1S1P61966 158 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 NSUN2Q08J23 767 aaKnown RBP eCLIP23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 ZNF423Q2M1K9 1284 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 MARC1Q5VT66 337 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 PIP4P1Q86T03 277 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 ZSWIM9Q86XI8 627 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 TMEM139Q8IV31 216 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 CXorf40AQ8TE69 158 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 NT5MQ9NPB1 228 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 SCUBE2Q9NQ36 999 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 DDX56Q9NY93 547 aaKnown RBP23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 SALL4Q9UJQ4 1053 aa23.9■■□□□ 1.42
RHBDD3-205ENST00000488106 ALG6Q9Y672 507 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms