RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PLXNB3Q9ULL4 1909 aa5.15□□□□□ -1.58
BRCA1-217ENST00000487825 ASCC3Q8N3C0 2202 aaKnown RBP5.15□□□□□ -1.58
BRCA1-217ENST00000487825 MBD3L4A6NDZ8 208 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 MBD3L3A6NE82 208 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 RAB27BO00194 218 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PPEF2O14830 753 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 RRP9O43818 475 aaKnown RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 BMP15O95972 392 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 SCG2P13521 617 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PLA2G2AP14555 144 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 CREB1P16220 341 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 KLRC1P26715 233 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 IL1R2P27930 398 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 SLC1A4P43007 532 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 DIO1P49895 249 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 RPS16P62249 146 aaKnown RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 STK3Q13188 491 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 G3BP1Q13283 466 aaKnown RBP eCLIP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF268Q14587 947 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PTPN14Q15678 1187 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 COL28A1Q2UY09 1125 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 HSDL1Q3SXM5 330 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 Q4G0T1 1027 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 AWAT1Q58HT5 328 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 FBXO47Q5MNV8 452 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 SLC9C2Q5TAH2 1124 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 STPG1Q5TH74 334 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 CTR9Q6PD62 1173 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PTCHD4Q6ZW05 846 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 RAB11FIP4Q86YS3 637 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 MRPL43Q8N983 215 aaKnown RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 VN1R3Q9BXE9 311 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 CWH43Q9H720 699 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 SFXN1Q9H9B4 322 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 ISY1Q9ULR0 285 aaKnown RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 NEUROG3Q9Y4Z2 214 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 PAXBP1Q9Y5B6 917 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 ANKRD17O75179 2603 aaKnown RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 FRMPD2Q68DX3 1309 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-217ENST00000487825 ASXL3Q9C0F0 2248 aa5.15□□□□□ -1.59
BRCA1-217ENST00000487825 APC2O95996 2303 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 ISM1B1AKI9 464 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 CD3EAPO15446 510 aaKnown RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 SPRY2O43597 315 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 BCAR3O75815 825 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 PIAS2O75928 621 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 MBD4O95243 580 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 EPCAMP16422 314 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 ATP5F1P24539 256 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 CD52P31358 61 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 PPM1AP35813 382 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 RPS9P46781 194 aaKnown RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 NOVA1P51513 510 aaKnown RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 TIRAPP58753 221 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 FMO1Q01740 532 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 ARHGEF7Q14155 803 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 NPY5RQ15761 445 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 RNF220Q5VTB9 566 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 C19orf48Q6RUI8 117 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 C15orf39Q6ZRI6 1047 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 TCEAL8Q8IYN2 117 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 FAM156AQ8NDB6 213 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 SLC22A17Q8WUG5 538 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 LRTOMTQ8WZ04 291 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 CLDN23Q96B33 292 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 CTHRC1Q96CG8 243 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 NMD3Q96D46 503 aaKnown RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 KLHL5Q96PQ7 755 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 LTB4R2Q9NPC1 389 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 TUBA8Q9NY65 449 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 MGAT4CQ9UBM8 478 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 ITGB1BP2Q9UKP3 347 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 MTF2Q9Y483 593 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-217ENST00000487825 SQORQ9Y6N5 450 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 PTPRBP23467 1997 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 CCDC171Q6TFL3 1326 aa5.14□□□□□ -1.59
BRCA1-217ENST00000487825 F5P12259 2224 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 ATMQ13315 3056 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 PNMA6EA0A0J9YXQ4 647 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 ANHXE9PGG2 379 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 AGPSO00116 658 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 FCHO1O14526 889 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 DSCR3O14972 297 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 CCP110O43303 1012 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 FRS3O43559 492 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MT-CO3P00414 261 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 LGALS2P05162 132 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MCCP23508 829 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 PGDP52209 483 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 RARSP54136 660 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 HTR4Q13639 388 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SIM2Q14190 667 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SLC29A2Q14542 456 aa5.13□□□□□ -1.59
BRCA1-217ENST00000487825 SF3A2Q15428 464 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 TRIP6Q15654 476 aaKnown RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 MLF2Q15773 248 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-217ENST00000487825 STXBP2Q15833 593 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms