RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 GJC1P36383 396 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 CDH6P55285 790 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 BNIP3Q12983 259 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 RFTN1Q14699 578 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-209ENST00000487617 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 ABI3BPQ7Z7G0 1075 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 SLCO6A1Q86UG4 719 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 CHCHD4Q8N4Q1 142 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 TSEN2Q8NCE0 465 aaKnown RBP20.67■□□□□ 0.9
HDAC4-209ENST00000487617 CCDC42Q96M95 316 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 C1QTNF2Q9BXJ5 285 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 CALN1Q9BXU9 219 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 SUV39H2Q9H5I1 410 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 NHEJ1Q9H9Q4 299 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-209ENST00000487617 FTSJ1Q9UET6 329 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 HS3ST3A1Q9Y663 406 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 GOLGA8CPA6NN73 597 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 RAD51BO15315 384 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TNFSF14O43557 240 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 ATXN1LP0C7T5 689 aaKnown RBP20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TMEM253P0C7T8 217 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 RGRP47804 291 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 CSNK1DP48730 415 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 Q6ZSR6 202 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 PTAR1Q7Z6K3 402 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-209ENST00000487617 RAB44Q7Z6P3 723 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-209ENST00000487617 SRLQ86TD4 932 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 CPNE8Q86YQ8 564 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 CNGA4Q8IV77 575 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 FAM174AQ8TBP5 190 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 HCAR2Q8TDS4 363 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 CXorf40AQ8TE69 158 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TSC1Q92574 1164 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 BMFQ96LC9 184 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 ZNF641Q96N77 438 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TUBGCP5Q96RT8 1024 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TRIM5Q9C035 493 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 SPTLC3Q9NUV7 552 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 RCOR3Q9P2K3 495 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-209ENST00000487617 SEPT3Q9UH03 358 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 LCMT1Q9UIC8 334 aa20.66■□□□□ 0.9
HDAC4-209ENST00000487617 TMEM110-MUSTN1A8MSY1 372 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 AKR1B15C9JRZ8 316 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 BUB1BO60566 1050 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 MMP20O60882 483 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ITIH2P19823 946 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 SERPINB6P35237 376 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 SUOXP51687 545 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 MMRN1Q13201 1228 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 LBRQ14739 615 aaKnown RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ATP13A4Q4VNC1 1196 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 TMCO4Q5TGY1 634 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 SARM1Q6SZW1 724 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 KYAT3Q6YP21 454 aaKnown RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 CAMK1DQ8IU85 385 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 EID2Q8N6I1 236 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ASB12Q8WXK4 309 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ADAMTS14Q8WXS8 1223 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ZNF599Q96NL3 588 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 LENG8Q96PV6 779 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 ATP13A3Q9H7F0 1226 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 KLHL11Q9NVR0 708 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 KLK13Q9UKR3 277 aa20.65■□□□□ 0.9
HDAC4-209ENST00000487617 TPRP12270 2363 aaKnown RBP20.65■□□□□ 0.9
HDAC4-209ENST00000487617 TSPAN11A1L157 253 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 POM121BA6NF01 834 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 FPGTO14772 594 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 SDC3O75056 442 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 CD48P09326 243 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 IL4RP24394 825 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 SERPINA4P29622 427 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 RENBPP51606 427 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 TAS2R40P59535 323 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 NSUN2Q08J23 767 aaKnown RBP eCLIP20.64■□□□□ 0.89
HDAC4-209ENST00000487617 SLC10A7Q0GE19 358 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-209ENST00000487617 BRAT1Q6PJG6 821 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 ATPAF2Q8N5M1 289 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 KCTD6Q8NC69 237 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 FAM71BQ8TC56 605 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 KLF6Q99612 283 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-209ENST00000487617 WRAP53Q9BUR4 548 aaKnown RBP20.64■□□□□ 0.89
HDAC4-209ENST00000487617 TOR4AQ9NXH8 423 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 NEUROG3Q9Y4Z2 214 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 DOCK9Q9BZ29 2069 aa20.64■□□□□ 0.89
HDAC4-209ENST00000487617 MUSKO15146 869 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 TM7SF2O76062 418 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 LDOC1O95751 146 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-209ENST00000487617 RABIFP47224 123 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 SCNN1BP51168 640 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 ARSEP51690 589 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 BCL2L1Q07817 233 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 ELP6Q0PNE2 266 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 DPYSL3Q14195 570 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 ZNF235Q14590 738 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 MESDQ14696 234 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 UGP2Q16851 508 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 CCDC157Q569K6 752 aa20.63■□□□□ 0.89
HDAC4-209ENST00000487617 DCP2Q8IU60 420 aaKnown RBP20.63■□□□□ 0.89
HDAC4-209ENST00000487617 SLC22A18ASQ8N1D0 253 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms