RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 OR56A4Q8NGH8 313 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 UPF1Q92900 1129 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 MARK4Q96L34 752 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 PCDHGB4Q9UN71 923 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 MFHAS1Q9Y4C4 1052 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 RBM47A0AV96 593 aaKnown RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 SOCS7O14512 581 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 IL2P60568 153 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 MPP1Q00013 466 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 FUT11Q495W5 492 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 RAB6CQ53S08 254 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 STXBP5Q5T5C0 1151 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 METTL21CQ5VZV1 264 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 STK40Q8N2I9 435 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 NKAPQ8N5F7 415 aaKnown RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 OR52K2Q8NGK3 314 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 OR6Y1Q8NGX8 325 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 GANCQ8TET4 914 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 SLC39A8Q9C0K1 460 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 RAB6CQ9H0N0 254 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 WDR55Q9H6Y2 383 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 NDUFAF1Q9Y375 327 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 TRIM17Q9Y577 477 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 PDE4DIPQ5VU43 2346 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 KLF11O14901 512 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SIN3BO75182 1162 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 VAV1P15498 845 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 OR1D2P34982 312 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 IKBKEQ14164 716 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 GALNT3Q14435 633 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CACHD1Q5VU97 1274 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 AFTPHQ6ULP2 937 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CNBD2Q96M20 576 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 FCRL5Q96RD9 977 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 C17orf80Q9BSJ5 609 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 C2orf49Q9BVC5 232 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 GATA5Q9BWX5 397 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 EMILIN2Q9BXX0 1053 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 DNAJC28Q9NX36 388 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 TM7SF2O76062 418 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SELPP16109 830 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 PIK3R1P27986 724 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 GJA5P36382 358 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 MRPS22P82650 360 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 BCL2L1Q07817 233 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 KLF10Q13118 480 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SAMD4BQ5PRF9 694 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CFAP52Q8N1V2 620 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 MIER2Q8N344 545 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SUSD3Q96L08 255 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SLC25A13Q9UJS0 675 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 V9GYQ6 96 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 KANSL1LA0AUZ9 987 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 TK2O00142 265 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 RAD51BO15315 384 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CXCR3P49682 368 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 NEK3P51956 506 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CCL23P55773 120 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 DSC2Q02487 901 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 DLG2Q15700 870 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 PTPRNQ16849 979 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 ARL13AQ5H913 290 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CLEC4FQ8N1N0 589 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 OR4L1Q8NH43 312 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 TRMOQ9BU70 441 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 MLPHQ9BV36 600 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 THUMPD3Q9BV44 507 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.5
TRA2B-214ENST00000487615 TAS2R1Q9NYW7 299 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 POLG2Q9UHN1 485 aa11.9□□□□□ -0.5
TRA2B-214ENST00000487615 SMCHD1A6NHR9 2005 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 MAGEC1O60732 1142 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 ESRRBO95718 433 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 ANPEPP15144 967 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 ITGB6P18564 788 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 TTPAP49638 278 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 NDST2P52849 883 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.51
TRA2B-214ENST00000487615 PLOD1Q02809 727 aaPredicted RBP11.9□□□□□ -0.51
TRA2B-214ENST00000487615 SLC30A9Q6PML9 568 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 GPSM1Q86YR5 675 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 ARFGAP1Q8N6T3 406 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 PCDH20Q8N6Y1 951 aaKnown RBP11.9□□□□□ -0.51
TRA2B-214ENST00000487615 KBTBD7Q8WVZ9 684 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 DLG3Q92796 817 aa11.9□□□□□ -0.51
TRA2B-214ENST00000487615 SUFUQ9UMX1 484 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms