RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 TUBA1CQ9BQE3 449 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 NPLQ9BXD5 320 aaPredicted RBP3.71□□□□□ -1.82
RBM39-234ENST00000487604 PCGF6Q9BYE7 350 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 ZNF700Q9H0M5 742 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 CHODLQ9H9P2 273 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 SPATS2LQ9NUQ6 558 aaKnown RBP3.71□□□□□ -1.82
RBM39-234ENST00000487604 ANKRD10Q9NXR5 420 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 PAM16Q9Y3D7 125 aa3.71□□□□□ -1.82
RBM39-234ENST00000487604 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CPED1A4D0V7 1026 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 FAM155BO75949 473 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CLDN14O95500 239 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 ADAP00813 363 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 TNNT1P13805 278 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CXCR3P49682 368 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 BRWD1-AS2P59051 145 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 BLMHQ13867 455 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CCDC38Q502W7 563 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CBWD5Q5RIA9 395 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 SYCP2LQ5T4T6 812 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 ARRDC2Q8TBH0 407 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 MTBPQ96DY7 904 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
RBM39-234ENST00000487604 PGLYRP2Q96PD5 576 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 CNPY2Q9Y2B0 182 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 ADAM18Q9Y3Q7 739 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 PCDHAC2Q9Y5I4 1007 aa3.7□□□□□ -1.82
RBM39-234ENST00000487604 HNRNPCL2B2RXH8 293 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 HSPA12AO43301 675 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 DHX16O60231 1041 aaKnown RBP3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE7O76087 117 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 KDM4BO94953 1096 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE12FP0CL80 117 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE12GP0CL81 117 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE12IP0CL82 117 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GLIPR1P48060 266 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 ZNF132P52740 706 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE1Q13065 139 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GAGE4Q13068 117 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 RBBP5Q15291 538 aaKnown RBP3.69□□□□□ -1.82
RBM39-234ENST00000487604 SLC18A3Q16572 532 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 CEP85LQ5SZL2 805 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 C1orf228Q6PIY5 440 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 UNQ6126/PRO20091Q6UXV3 157 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 GHDCQ8N2G8 530 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 ZNF441Q8N8Z8 693 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 TMEM170AQ8WVE7 144 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 HSPH1Q92598 858 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 OR1F2PQ96R84 312 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 CSF3RQ99062 836 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 SAYSD1Q9NPB0 183 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 SMARCAL1Q9NZC9 954 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 SNX9Q9Y5X1 595 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 WDR81Q562E7 1941 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 ADGRF5Q8IZF2 1346 aa3.69□□□□□ -1.82
RBM39-234ENST00000487604 STX16-NPEPL1H3BU86 382 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 STX16O14662 325 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 PAK4O96013 591 aaPredicted RBP3.68□□□□□ -1.82
RBM39-234ENST00000487604 TFPIP10646 304 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 ADD2P35612 726 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 PIGAP37287 484 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 AARSP49588 968 aaKnown RBP eCLIP3.68□□□□□ -1.824e-6■□□□□ 9.4
RBM39-234ENST00000487604 GOLGA8FQ08AF8 430 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 ZBTB17Q13105 803 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 FAM83BQ5T0W9 1011 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 SHFQ7M4L6 423 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 ZC3HC1Q86WB0 502 aaKnown RBP3.68□□□□□ -1.82
RBM39-234ENST00000487604 CHD1LQ86WJ1 897 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 MAB21L3Q8N8X9 362 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 DNAAF1Q8NEP3 725 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 SECTM1Q8WVN6 248 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 POF1BQ8WVV4 589 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 RUBCNQ92622 972 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 MMTAG2Q9BU76 263 aaKnown RBP3.68□□□□□ -1.82
RBM39-234ENST00000487604 MMP28Q9H239 520 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 TTC12Q9H892 705 aaPredicted RBP3.68□□□□□ -1.82
RBM39-234ENST00000487604 EBF2Q9HAK2 575 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 NOX4Q9NPH5 578 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 PLCB1Q9NQ66 1216 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 NDRG3Q9UGV2 375 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 SLCO3A1Q9UIG8 710 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 NOTCH3Q9UM47 2321 aa3.68□□□□□ -1.82
RBM39-234ENST00000487604 F5H423 210 aaPredicted RBP3.67□□□□□ -1.82
RBM39-234ENST00000487604 EBAG9O00559 213 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 PLIN1O60240 522 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 LINC00271P0C7V0 271 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 VEGFAP15692 232 aaPredicted RBP3.67□□□□□ -1.82
RBM39-234ENST00000487604 ANOS1P23352 680 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 RYKP34925 604 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 CRIP2P52943 208 aaPredicted RBP3.67□□□□□ -1.82
RBM39-234ENST00000487604 NLRP5P59047 1200 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 TROAPQ12815 778 aa3.67□□□□□ -1.82
RBM39-234ENST00000487604 ZNF155Q12901 538 aaPredicted RBP3.67□□□□□ -1.82
RBM39-234ENST00000487604 CHAF1AQ13111 956 aaPredicted RBP3.67□□□□□ -1.82
RBM39-234ENST00000487604 PMS2CLQ68D20 193 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms