RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GATA6Q92908 595 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 BMFQ96LC9 184 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 CSPG4P5Q96PW8 444 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 KLF6Q99612 283 aaPredicted RBP11.59□□□□□ -0.55
SPEN-205ENST00000487496 DNAJC7Q99615 494 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 SP110Q9HB58 689 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 DKK3Q9UBP4 350 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 FTSJ1Q9UET6 329 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 IPO11Q9UI26 975 aaKnown RBP11.59□□□□□ -0.55
SPEN-205ENST00000487496 CEP295Q9C0D2 2601 aa11.59□□□□□ -0.55
SPEN-205ENST00000487496 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
SPEN-205ENST00000487496 POM121BA6NF01 834 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 GOLGA8CPA6NN73 597 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 A6NNZ2 444 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 SDC3O75056 442 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 PALMO75781 387 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 PIGNO95427 931 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 PROS1P07225 676 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 TRIM14Q14142 442 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 GRM3Q14832 879 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 SLC18A3Q16572 532 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 ZNF564Q8TBZ8 553 aaPredicted RBP11.58□□□□□ -0.56
SPEN-205ENST00000487496 HCAR2Q8TDS4 363 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 TEKT4Q8WW24 435 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 TSC1Q92574 1164 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 LENG8Q96PV6 779 aaPredicted RBP11.58□□□□□ -0.56
SPEN-205ENST00000487496 CALN1Q9BXU9 219 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 PACSIN1Q9BY11 444 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 SUV39H2Q9H5I1 410 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 PCDH18Q9HCL0 1135 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 GPR27Q9NS67 375 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 ETNK2Q9NVF9 386 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 TRPM6Q9BX84 2022 aa11.58□□□□□ -0.56
SPEN-205ENST00000487496 SSU72P8A0A1W2PR75 194 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 TSPAN11A1L157 253 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 ENC1O14682 589 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 FPGTO14772 594 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 MUSKO15146 869 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 BUB1BO60566 1050 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 MMP20O60882 483 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 LDOC1O95751 146 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 H2AFZP0C0S5 128 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 IL4RP24394 825 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 SSR1P43307 286 aaKnown RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 RABIFP47224 123 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CSNK1DP48730 415 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 SUOXP51687 545 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPEN-205ENST00000487496 SLC10A7Q0GE19 358 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 RFTN1Q14699 578 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 UGP2Q16851 508 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 KYAT3Q6YP21 454 aaKnown RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 H2AFVQ71UI9 128 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 PTAR1Q7Z6K3 402 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 SRLQ86TD4 932 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CPNE8Q86YQ8 564 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 DCP2Q8IU60 420 aaKnown RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 CAMK1DQ8IU85 385 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 SLC25A45Q8N413 288 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CTNNBL1Q8WYA6 563 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 CENPTQ96BT3 561 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CNDP2Q96KP4 475 aaKnown RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 ZNF641Q96N77 438 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 TUBGCP5Q96RT8 1024 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CHP1Q99653 195 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 CINPQ9BW66 212 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 CAAP1Q9H8G2 361 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 ABHD10Q9NUJ1 306 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 ZNHIT6Q9NWK9 470 aaKnown RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 CTTNBP2NLQ9P2B4 639 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 UVRAGQ9P2Y5 699 aa11.57□□□□□ -0.56
SPEN-205ENST00000487496 TP53BP1Q12888 1972 aaPredicted RBP11.57□□□□□ -0.56
SPEN-205ENST00000487496 AKR1B10O60218 316 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 MAFKO60675 156 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 MFAP3LO75121 409 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 TM7SF2O76062 418 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 PROSCO94903 275 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 PEX11BO96011 259 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 CD48P09326 243 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 TPM1P09493 284 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 XPAP23025 273 aaPredicted RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 DGKAP23743 735 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 ADKP55263 362 aaKnown RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 CDH6P55285 790 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 PFN3P60673 137 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 ELP6Q0PNE2 266 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 DNAJC3Q13217 504 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 FZD2Q14332 565 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 KRT81Q14533 505 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 LBRQ14739 615 aaKnown RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 HADHQ16836 314 aaKnown RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 TSR1Q2NL82 804 aaKnown RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 TMEM52BQ4KMG9 183 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 ATP13A4Q4VNC1 1196 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 CCDC157Q569K6 752 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 BRAT1Q6PJG6 821 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms