RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SERPINB5P36952 375 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 PPARGP37231 505 aaPredicted RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 ERFP50548 548 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 ESRP1Q6NXG1 681 aaKnown RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 SLC41A1Q8IVJ1 513 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 KYQ8NBH2 561 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 ZNF419Q96HQ0 510 aaPredicted RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 SCYL1Q96KG9 808 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 GLT1D1Q96MS3 346 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 FTHL17Q9BXU8 183 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 TREX1Q9NSU2 369 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 TMEM248Q9NWD8 314 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 A0A087X1B8 175 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 CCDC189A1A4V9 331 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 MOXD2PA6NHM9 499 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 DLX3O60479 287 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 ZMPSTE24O75844 475 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 UPP2O95045 317 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 DDR2Q16832 855 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 TRAF7Q6Q0C0 670 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 KIAA0408Q6ZU52 694 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 ZNF683Q8IZ20 524 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 C2CD4AQ8NCU7 369 aaPredicted RBP26.35■■□□□ 1.81
HLA-C-208ENST00000487245 RANBP9Q96S59 729 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 ZIC5Q96T25 663 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 TSC22D3Q99576 134 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 VPS45Q9NRW7 570 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 CDYLQ9Y232 598 aa26.35■■□□□ 1.81
HLA-C-208ENST00000487245 FAM95CA0A1B0GW59 222 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 OR6C75A6NL08 312 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 ELNP15502 786 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 STMN1P16949 149 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 ARNTP27540 789 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 KPNA2P52292 529 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 NAGLUP54802 743 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 WNT3AP56704 352 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 DNAJB13P59910 316 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 PEX6Q13608 980 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 VARS2Q5ST30 1063 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 KDELC1Q6UW63 502 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 SNX32Q86XE0 403 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 CALML6Q8TD86 181 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 GDPD5Q8WTR4 605 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 CCDC124Q96CT7 223 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 PPP1R12CQ9BZL4 782 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 NOL6Q9H6R4 1146 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 WDR55Q9H6Y2 383 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 CLIC5Q9NZA1 410 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 ZDHHC2Q9UIJ5 367 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 NYNRINQ9P2P1 1898 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 HEATR9A2RTY3 570 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 RTN3O95197 1032 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 UQCRBP14927 111 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 RAG1P15918 1043 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 RFTN1Q14699 578 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 LINC01599Q8WXQ3 324 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 IMP4Q96G21 291 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 BTBD9Q96Q07 612 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 TRPV6Q9H1D0 765 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 EBF3Q9H4W6 596 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 C6orf203Q9P0P8 240 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 GMIPQ9P107 970 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 XPR1Q9UBH6 696 aa26.34■■□□□ 1.81
HLA-C-208ENST00000487245 ABT1Q9ULW3 272 aaKnown RBP26.34■■□□□ 1.81
HLA-C-208ENST00000487245 FAM92AA1XBS5 289 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 CCDC78A2IDD5 438 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 UBTFL6P0CB48 400 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 YWHAQP27348 245 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 CD151P48509 253 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 MSLNQ13421 630 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 CYLC2Q14093 348 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 TRIP4Q15650 581 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 CTXN3Q4LDR2 81 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 SFT2D3Q587I9 215 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 MS4A13Q5J8X5 152 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 TCHHL1Q5QJ38 904 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 SH2D4BQ5SQS7 431 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 TMEM126BQ8IUX1 230 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 MFSD6LQ8IWD5 586 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 HHIPL1Q96JK4 782 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 BTN2A3PQ96KV6 586 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 MRPL57Q9BQC6 102 aaKnown RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 TSEN34Q9BSV6 310 aaKnown RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 MRPL46Q9H2W6 279 aaKnown RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 SLC24A3Q9HC58 644 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 COMMD8Q9NX08 183 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 BCAP29Q9UHQ4 241 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 PSMD13Q9UNM6 376 aa26.33■■□□□ 1.81
HLA-C-208ENST00000487245 PRG3Q9Y2Y8 225 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-208ENST00000487245 IGLV3-10A0A075B6K4 115 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 GOLGA8QA0A0J9YX86 632 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 GOLGA8OA6NCC3 632 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 GOLGA8NF8WBI6 632 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 SMIM24O75264 130 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 PEX11BO96011 259 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 SAT1P21673 171 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 MPP1Q00013 466 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 POU4F1Q01851 419 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 TNK2Q07912 1038 aa26.32■■□□□ 1.8
HLA-C-208ENST00000487245 MTA1Q13330 715 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms