RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TAF4O00268 1085 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 PIAS2O75928 621 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 TIMP2P16035 220 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 ERCC2P18074 760 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 PAPOLAP51003 745 aaKnown RBP19.32■□□□□ 0.68
CLIP2-206ENST00000487091 ZBED6P86452 979 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 CAMK2BQ13554 666 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 TDRD12Q587J7 1177 aaKnown RBP19.32■□□□□ 0.68
CLIP2-206ENST00000487091 VPS36Q86VN1 386 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 NETO2Q8NC67 525 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 OR4C6Q8NH72 309 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 CELF6Q96J87 481 aaKnown RBP19.32■□□□□ 0.68
CLIP2-206ENST00000487091 DKK4Q9UBT3 224 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 GGT7Q9UJ14 662 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 CAPN11Q9UMQ6 739 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 WDFY3Q8IZQ1 3526 aa19.32■□□□□ 0.68
CLIP2-206ENST00000487091 ACACAQ13085 2346 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 SPTY2D1-AS1A0A0U1RR47 76 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 TRIM38O00635 465 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 INSIG1O15503 277 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 SERPING1P05155 500 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 ACP1P24666 158 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 CSNK1DP48730 415 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 PFN3P60673 137 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 HNRNPKP61978 463 aaKnown RBP eCLIP19.31■□□□□ 0.68
CLIP2-206ENST00000487091 FZD2Q14332 565 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 BOLA3Q53S33 107 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 HS1BP3Q53T59 392 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 PPP6R3Q5H9R7 873 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-206ENST00000487091 ARHGAP12Q8IWW6 846 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 LZTR1Q8N653 840 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 CXorf40AQ8TE69 158 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 CENPTQ96BT3 561 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 ZNF641Q96N77 438 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-206ENST00000487091 UCKL1Q9NWZ5 548 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 CHD6Q8TD26 2715 aa19.31■□□□□ 0.68
CLIP2-206ENST00000487091 TSPAN11A1L157 253 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 TRABD2BA6NFA1 517 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 NEMP2A6NFY4 417 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 SIGLEC6O43699 453 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 TM7SF2O76062 418 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 GIMD1P0DJR0 217 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 ELP6Q0PNE2 266 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 DPYSQ14117 519 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 PIGHQ14442 188 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 TMEM52BQ4KMG9 183 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 PARGQ86W56 976 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 PDCD7Q8N8D1 485 aaKnown RBP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 EXOC2Q96KP1 924 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 TUBGCP5Q96RT8 1024 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 C1QTNF7Q9BXJ2 289 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 SUV39H2Q9H5I1 410 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 ZWILCHQ9H900 591 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 DNAJC28Q9NX36 388 aa19.3■□□□□ 0.68
CLIP2-206ENST00000487091 CWC15Q9P013 229 aaKnown RBP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 IPO11Q9UI26 975 aaKnown RBP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 ANKRD11Q6UB99 2663 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-206ENST00000487091 FAM149AA5PLN7 773 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 TOR1BO14657 336 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 SCAMP1O15126 338 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 MMP20O60882 483 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 PALMO75781 387 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 CSF2P04141 144 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 ALPPL2P10696 532 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 JUPP14923 745 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 XPAP23025 273 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-206ENST00000487091 HNF1BP35680 557 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 NSUN2Q08J23 767 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLIP2-206ENST00000487091 RFTN1Q14699 578 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-206ENST00000487091 DPYSL2Q16555 572 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 MARCH9Q86YJ5 346 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 CPLX3Q8WVH0 158 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 NLGN3Q9NZ94 848 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 LUC7L2Q9Y383 392 aaKnown RBP19.29■□□□□ 0.68
CLIP2-206ENST00000487091 PKD1L2Q7Z442 2459 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 APC2O95996 2303 aa19.29■□□□□ 0.68
CLIP2-206ENST00000487091 H3BM21 787 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 H3BRJ5 948 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 PIGNO95427 931 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 NME1P15531 152 aaKnown RBP19.28■□□□□ 0.68
CLIP2-206ENST00000487091 ITIH2P19823 946 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 IL1R2P27930 398 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 YPEL5P62699 121 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 E2F1Q01094 437 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 IL10RBQ08334 325 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 PDE1CQ14123 709 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-206ENST00000487091 PTK2BQ14289 1009 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 UGP2Q16851 508 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 LRRC73Q5JTD7 316 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 BRAT1Q6PJG6 821 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 SRLQ86TD4 932 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 CACTIN-AS1Q8N1I8 211 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 NPWQ8N729 165 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 NIPA2Q8N8Q9 360 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 FAM181AQ8N9Y4 354 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 TSEN2Q8NCE0 465 aaKnown RBP19.28■□□□□ 0.68
CLIP2-206ENST00000487091 MDM1Q8TC05 714 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 RFFLQ8WZ73 363 aa19.28■□□□□ 0.68
CLIP2-206ENST00000487091 DUSP23Q9BVJ7 150 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms