RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TSPAN6O43657 245 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 MMP13P45452 471 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 SCNN1BP51168 640 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 RPS21P63220 83 aaKnown RBP18.4■□□□□ 0.54
COL1A1-207ENST00000486572 BNC1Q01954 994 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 IFI16Q16666 785 aaKnown RBP18.4■□□□□ 0.54
COL1A1-207ENST00000486572 ZNF284Q2VY69 593 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 TMEM259Q4ZIN3 620 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 CFAP58Q5T655 872 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 SEL1L3Q68CR1 1132 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 IL27RAQ6UWB1 636 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 TTC7BQ86TV6 843 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 ZSCAN30Q86W11 494 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 CAMK1DQ8IU85 385 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 KATNAL2Q8IYT4 538 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 OR2I1PQ8NGU4 316 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 SKA1Q96BD8 255 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 FEM1CQ96JP0 617 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 TSGA13Q96PP4 275 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 MGME1Q9BQP7 344 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 SUV39H2Q9H5I1 410 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 DTLQ9NZJ0 730 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 ZFR2Q9UPR6 939 aaKnown RBP18.4■□□□□ 0.54
COL1A1-207ENST00000486572 ITM2BQ9Y287 266 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 ANKRD6Q9Y2G4 727 aa18.4■□□□□ 0.54
COL1A1-207ENST00000486572 PRAMEF26H0Y7S4 382 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 AREL1O15033 823 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 SPINT1O43278 529 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 OPHN1O60890 802 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 GJB3O75712 270 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 CER1O95813 267 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 PRLRP16471 622 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 ZFXP17010 805 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-207ENST00000486572 XPAP23025 273 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-207ENST00000486572 CCNCP24863 283 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 CD38P28907 300 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 CDKN2BP42772 138 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 SUOXP51687 545 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 C21orf59P57076 290 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 BCL2L1Q07817 233 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 KIF5AQ12840 1032 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 SLC10A2Q12908 348 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-207ENST00000486572 HNRNPDQ14103 355 aaKnown RBP18.39■□□□□ 0.53
COL1A1-207ENST00000486572 KIF19Q2TAC6 998 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 UAP1L1Q3KQV9 507 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 SLC45A4Q5BKX6 768 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 LRRC73Q5JTD7 316 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 BRAT1Q6PJG6 821 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 RFX6Q8HWS3 928 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 PGBD5Q8N414 524 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 FATE1Q969F0 183 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 HDAC11Q96DB2 347 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 DNAAF2Q9NVR5 837 aaKnown RBP18.39■□□□□ 0.53
COL1A1-207ENST00000486572 GGT7Q9UJ14 662 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 HEY1Q9Y5J3 304 aa18.39■□□□□ 0.53
COL1A1-207ENST00000486572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-207ENST00000486572 A0A1W2PR77 199 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 DCDC2BA2VCK2 349 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 TM4SF5O14894 197 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 WNT9AO14904 365 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 MATN3O15232 486 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 SLC31A1O15431 190 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 TIMP2P16035 220 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 CR2P20023 1033 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 MARCKSL1P49006 195 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 TAZQ16635 292 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 SPOCD1Q6ZMY3 1216 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 DGLUCYQ7Z3D6 616 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 TEX26Q8N6G2 289 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 CCDC112Q8NEF3 446 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 MAML1Q92585 1016 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 KLK6Q92876 244 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 GAREM1Q9H706 876 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 SCUBE2Q9NQ36 999 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 SNX11Q9Y5W9 270 aa18.38■□□□□ 0.53
COL1A1-207ENST00000486572 SHROOM3Q8TF72 1996 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 MACROD2A1Z1Q3 448 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 UPK3BL1B0FP48 263 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 UPK3BL2E5RIL1 263 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 ZRANB2O95218 330 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL1A1-207ENST00000486572 WNT1P04628 370 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 HNRNPA2B1P22626 353 aaKnown RBP18.37■□□□□ 0.53
COL1A1-207ENST00000486572 AKT2P31751 481 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 CTNNA1P35221 906 aaKnown RBP18.37■□□□□ 0.53
COL1A1-207ENST00000486572 CTSKP43235 329 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 MAXP61244 160 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 DYNLT1P63172 113 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 ELP6Q0PNE2 266 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 TFDP2Q14188 446 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 STAT4Q14765 748 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 UGP2Q16851 508 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 HLA-BQ31612 363 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 TFDP3Q5H9I0 405 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 RALGPS1Q5JS13 557 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 CCDC13Q8IYE1 715 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 RCOR2Q8IZ40 523 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 PAF1Q8N7H5 531 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms