RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 OR13J1Q8NGT2 312 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 BRSK1Q8TDC3 778 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 TSPAN17Q96FV3 270 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TSNARE1Q96NA8 513 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 YME1L1Q96TA2 773 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 MECRQ9BV79 373 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 C1QTNF1Q9BXJ1 281 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 ECT2Q9H8V3 914 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 IL21Q9HBE4 155 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 IL1RAPL1Q9NZN1 696 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TMEM216Q9P0N5 145 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 LNPEPQ9UIQ6 1025 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TLK1Q9UKI8 766 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 RPL26L1Q9UNX3 145 aaKnown RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 LZTS1Q9Y250 596 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 BRCA2P51587 3418 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 SOBPA7XYQ1 873 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 TEX28O15482 410 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 LDB2O43679 373 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 GREM1O60565 184 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 SLC35E2BP0CK96 405 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 STMN1P16949 149 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 OGNP20774 298 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 CHRNA4P43681 627 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 RPS24P62847 133 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 SLC7A9P82251 487 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 ASPHQ12797 758 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 IHHQ14623 411 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 TTC31Q49AM3 519 aaPredicted RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 ZNF470Q6ECI4 717 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 CXorf57Q6NSI4 855 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 RFWD3Q6PCD5 774 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 CMC1Q7Z7K0 106 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 WDR75Q8IWA0 830 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 CPXM2Q8N436 756 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 PPP1R14CQ8TAE6 165 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 PIWIL2Q8TC59 973 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 KLHL29Q96CT2 875 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 NUDCD1Q96RS6 583 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 CINPQ9BW66 212 aaPredicted RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 TMEM120AQ9BXJ8 343 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 RNF38Q9H0F5 515 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 NMRAL1Q9HBL8 299 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
PKP4-213ENST00000486254 GGT7Q9UJ14 662 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 ZFP69BQ9UJL9 534 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 HAO1Q9UJM8 370 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 ACOT9Q9Y305 439 aa12.06□□□□□ -0.48
PKP4-213ENST00000486254 A0A0D9SEW6 157 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 FAM95CA0A1B0GW59 222 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 G3V2L1 256 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 MUSKO15146 869 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 MYL2P10916 166 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 RALBP11234 206 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 ITGB8P26012 769 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 SERPINB5P36952 375 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 MAXP61244 160 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 ITKQ08881 620 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 USP10Q14694 798 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 PCSK7Q16549 785 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 LILRA6Q6PI73 481 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 ZYG11AQ6WRX3 759 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 CILP2Q8IUL8 1156 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 DCAF4L2Q8NA75 395 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 STYXQ8WUJ0 223 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 IFT43Q96FT9 208 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 DNMT3BQ9UBC3 853 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 HELZP42694 1942 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 A0A0G2JND7 137 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 C2orf78A6NCI8 922 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 TARM1B6A8C7 271 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 INSIG1O15503 277 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 MGRN1O60291 552 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 CCDC22O60826 627 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 TRIM13O60858 407 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 ZMPSTE24O75844 475 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 FGF18O76093 207 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 HAUS5O94927 633 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 KLHL2O95198 593 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 FGF19O95750 216 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 TOP3BO95985 862 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 ADH1AP07327 375 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 MBL2P11226 248 aaPredicted RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 NQO1P15559 274 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 CDC25CP30307 473 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 SLC1A6P48664 564 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms