RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MARC1Q5VT66 337 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 AFMIDQ63HM1 303 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 RNF43Q68DV7 783 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 HEATR6Q6AI08 1181 aaKnown RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 TIGD7Q6NT04 549 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 C22orf39Q6P5X5 142 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 ZNF783Q6ZMS7 281 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 GSTA5Q7RTV2 222 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 PID1Q7Z2X4 250 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 KIAA0907Q7Z7F0 614 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 SYT9Q86SS6 491 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 PRUNE1Q86TP1 453 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 VSIG1Q86XK7 387 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 CDKL3Q8IVW4 592 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 KLHL7Q8IXQ5 586 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 CCDC13Q8IYE1 715 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 BBS5Q8N3I7 341 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 SH2D3CQ8N5H7 860 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 PJA1Q8NG27 643 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 KIF18AQ8NI77 898 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 RHBDD1Q8TEB9 315 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 TFB1MQ8WVM0 346 aaKnown RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 MAIP1Q8WWC4 291 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 MAGOHBQ96A72 148 aaKnown RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 TTC17Q96AE7 1141 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 HDAC11Q96DB2 347 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 MRGPRX3Q96LB0 322 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 AGAP3Q96P47 875 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 NELL2Q99435 816 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 TMEM121Q9BTD3 319 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 ACE2Q9BYF1 805 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 RETREG1Q9H6L5 497 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 FAM86C1Q9NVL1 165 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 RBM22Q9NW64 420 aaKnown RBP eCLIP5.72□□□□□ -1.49
COPS3-208ENST00000486032 SPATA6Q9NWH7 488 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 KLHL8Q9P2G9 620 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 THAP10Q9P2Z0 257 aaPredicted RBP5.72□□□□□ -1.49
COPS3-208ENST00000486032 DNPEPQ9ULA0 475 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 ZNF148Q9UQR1 794 aa5.72□□□□□ -1.49
COPS3-208ENST00000486032 ZSCAN5CA6NGD5 496 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 HACD1B0YJ81 288 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 MATN3O15232 486 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 INSIG1O15503 277 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 LIASO43766 372 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 GPR37L1O60883 481 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 SIN3BO75182 1162 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 GJB3O75712 270 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CD160O95971 181 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 IGSF6O95976 241 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 IFNB1P01574 187 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 HLA-DQB2P05538 268 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCNB1P14635 433 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCNCP24863 283 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 MMP13P45452 471 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 PXNP49023 591 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 NR2C2P49116 596 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 VPS41P49754 854 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 SCNN1BP51168 640 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 GEMIN4P57678 1058 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 MRPS25P82663 173 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 MRPS21P82921 87 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 PPIDQ08752 370 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 SLC10A7Q0GE19 358 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 ZBTB17Q13105 803 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCINQ13939 588 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 STARD3Q14849 445 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 SIX1Q15475 284 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 TRIP13Q15645 432 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 SLC45A4Q5BKX6 768 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CARD16Q5EG05 197 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 TMEM31Q5JXX7 168 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 EOGTQ5NDL2 527 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 FAXCQ5TGI0 409 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 TMCO4Q5TGY1 634 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 KIAA1211LQ6NV74 962 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 KIAA1324Q6UXG2 1013 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 TRMT11Q7Z4G4 463 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 KDELC2Q7Z4H8 507 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CREG2Q8IUH2 290 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCDC105Q8IYK2 499 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 STK40Q8N2I9 435 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 RASGEF1CQ8N431 466 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 PRELID2Q8N945 189 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 FAM71DQ8N9W8 422 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 IL17RCQ8NAC3 791 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 C1orf216Q8TAB5 229 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCDC26Q8TAB7 109 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 CCDC110Q8TBZ0 833 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 GRIN3AQ8TCU5 1115 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 ACTRT1Q8TDG2 376 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 GANCQ8TET4 914 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 PDCD6IPQ8WUM4 868 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 UBE2Q2Q8WVN8 375 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 HTR3CQ8WXA8 447 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 MYO19Q96H55 970 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 QKIQ96PU8 341 aaKnown RBP eCLIP5.71□□□□□ -1.5
COPS3-208ENST00000486032 HHIPQ96QV1 700 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms