RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MLNP12872 115 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 POLR2EP19388 210 aaKnown RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 CTHP32929 405 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 CD86P42081 329 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 CSNK1DP48730 415 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 RHOAP61586 193 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 IFFO1Q0D2I5 559 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 MSLNQ13421 630 aaPredicted RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 SPARCL1Q14515 664 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 PRPSAP1Q14558 356 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 EIF4HQ15056 248 aaKnown RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 RALGPS1Q5JS13 557 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 DENND5AQ6IQ26 1287 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 RANBP10Q6VN20 620 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 KDM7AQ6ZMT4 941 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 PLPP6Q8IY26 295 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 ATP11CQ8NB49 1132 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 KDM1BQ8NB78 822 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 CYB5D2Q8WUJ1 264 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 PBXIP1Q96AQ6 731 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 TRIB3Q96RU7 358 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 FRMD8Q9BZ67 464 aaPredicted RBP11.45□□□□□ -0.58
SND1-212ENST00000485871 EPB41L4BQ9H329 900 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 LRRC40Q9H9A6 602 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 NOD2Q9HC29 1040 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 SLC2A4RGQ9NR83 387 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 ELOVL2Q9NXB9 296 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
SND1-212ENST00000485871 ATG2BQ96BY7 2078 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 LOC285095A0A1B0GVY8 99 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 E7EVH7 732 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.58
SND1-212ENST00000485871 FZD6O60353 706 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 USP12O75317 370 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 PMPCBO75439 489 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 BANF1O75531 89 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 NEBLO76041 1014 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 KAT7O95251 611 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 GSRP00390 522 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 PRLP01236 227 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 CES1P23141 567 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 GALK1P51570 392 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 WNT3AP56704 352 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ENPP2Q13822 863 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 FASTKD3Q14CZ7 662 aaKnown RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 DLG2Q15700 870 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 HIF1AQ16665 826 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ATXN7L2Q5T6C5 722 aaPredicted RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 UBAP2Q5T6F2 1119 aaKnown RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 LRRC8BQ6P9F7 803 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 SRLQ86TD4 932 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 RALGPS2Q86X27 583 aaPredicted RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 RNF135Q8IUD6 432 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.44□□□□□ -0.58
SND1-212ENST00000485871 PCDH20Q8N6Y1 951 aaKnown RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 OR2AP1Q8NGE2 309 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 CSGALNACT1Q8TDX6 532 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 EDAQ92838 391 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 TM6SF2Q9BZW4 377 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ROPN1BQ9BZX4 212 aaPredicted RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 TNKS2Q9H2K2 1166 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 TMEM245Q9H330 911 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ROPN1Q9HAT0 212 aaPredicted RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 ARNT2Q9HBZ2 717 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 HEBP1Q9NRV9 189 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 STARD13Q9Y3M8 1113 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 TEX264Q9Y6I9 313 aa11.44□□□□□ -0.58
SND1-212ENST00000485871 ZNF106Q9H2Y7 1883 aaKnown RBP11.44□□□□□ -0.58
SND1-212ENST00000485871 ZNF318Q5VUA4 2279 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 WASH3PC4AMC7 463 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 K7EQS6 105 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ALOX15BO15296 676 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TIMM44O43615 452 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 AVILO75366 819 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 AGTP01019 485 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 EPOP01588 193 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ATP5BP06576 529 aaKnown RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 SERPINF2P08697 491 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ATXN1LP0C7T5 689 aaKnown RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 SRFP11831 508 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 HNRNPLP14866 589 aaKnown RBP eCLIP11.43□□□□□ -0.58
SND1-212ENST00000485871 NR1D1P20393 614 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ATP5DP30049 168 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 GRIA2P42262 883 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 CHRNA4P43681 627 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 SCNN1BP51168 640 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ARL4CP56559 192 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 AP1S1P61966 158 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ITKQ08881 620 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 ZNF844Q08AG5 666 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms