RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ABL2P42684 1182 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 CTSKP43235 329 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 MMP13P45452 471 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 CSNK1DP48730 415 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 ARSEP51690 589 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 IL9RQ01113 521 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 NSUN2Q08J23 767 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 SLC10A7Q0GE19 358 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 ELP6Q0PNE2 266 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 PRAMEF14Q5SWL7 426 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 TIGD7Q6NT04 549 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 KIAA1328Q86T90 577 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 RFX6Q8HWS3 928 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 NAXDQ8IW45 347 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 CCNYQ8ND76 341 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 PCDH19Q8TAB3 1148 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 HCAR2Q8TDS4 363 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 NT5MQ9NPB1 228 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 ITM2BQ9Y287 266 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 FNDC3AQ9Y2H6 1198 aaKnown RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 GVINP1Q7Z2Y8 2422 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 NUP205Q92621 2012 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 DOCK4Q8N1I0 1966 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 A0A1W2PR77 199 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 FPGTO14772 594 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 APOL1O14791 398 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 BUB1BO60566 1050 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 MAFKO60675 156 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 MMP20O60882 483 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 GJB3O75712 270 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 TM7SF2O76062 418 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 MAP3K6O95382 1288 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ITGAVP06756 1048 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 THEGLP0DJG4 465 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ZFXP17010 805 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 MX2P20592 715 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 CDC25BP30305 580 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 RGRP47804 291 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ARRB1P49407 418 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 SUOXP51687 545 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 CLDN2P57739 230 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 NXPH1P58417 271 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 AP1S1P61966 158 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 FAM193AP78312 1265 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 OVGP1Q12889 678 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 IFI16Q16666 785 aaKnown RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 N4BP2L1Q5TBK1 243 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 LRRC38Q5VT99 294 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 NCBP2-AS2Q69YL0 99 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 BRAT1Q6PJG6 821 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 PTAR1Q7Z6K3 402 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 IQCHQ86VS3 1027 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 OXR1Q8N573 874 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 PDCD6IPQ8WUM4 868 aaKnown RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 CAMK1GQ96NX5 476 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 RNF157Q96PX1 679 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 WRAP53Q9BUR4 548 aaKnown RBP12.64□□□□□ -0.39
PTCD1-205ENST00000485746 C1QTNF7Q9BXJ2 289 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 GGT7Q9UJ14 662 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
PTCD1-205ENST00000485746 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 A6NNZ2 444 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 YKT6O15498 198 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 FLRT2O43155 660 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 LCA5LO95447 670 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 ITIH2P19823 946 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 NFKBIAP25963 317 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 GARSP41250 739 aaKnown RBP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 MAXP61244 160 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 TRIP6Q15654 476 aaKnown RBP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 UGP2Q16851 508 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 PIP4P1Q86T03 277 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 TXLNBQ8N3L3 684 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTCD1-205ENST00000485746 FAM174AQ8TBP5 190 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 PSKH2Q96QS6 385 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 TFR2Q9UP52 801 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms