RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	EMSY	Q7Z589	1322 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	KDM3A	Q9Y4C1	1321 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	CUL9	Q8IWT3	2517 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	ABCC3	O15438	1527 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SPHKAP	Q2M3C7	1700 aa		4.15	□□□□□ -1.74
VPS8-223	ENST00000485024	RICTOR	Q6R327	1708 aa		4.15	□□□□□ -1.74
VPS8-223	ENST00000485024	DNMT1	P26358	1616 aa	Known RBP	4.15	□□□□□ -1.74
VPS8-223	ENST00000485024	MYO3A	Q8NEV4	1616 aa		4.15	□□□□□ -1.74
VPS8-223	ENST00000485024	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	CD8B2	A6NJW9	211 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024		E5RJQ4	531 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	NTN3	O00634	580 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF500	O60304	480 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	EXOC3	O60645	756 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	JTB	O76095	146 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	IRF1	P10914	325 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	HSPA8	P11142	646 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	AKR1A1	P14550	325 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	NFKBIA	P25963	317 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	BLK	P51451	505 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	HILS1	P60008	231 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	RPS3A	P61247	264 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	UFM1	P61960	85 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	PRAME	P78395	509 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	B4GALNT1	Q00973	533 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	DMWD	Q09019	674 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	DCTN2	Q13561	401 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	CRYM	Q14894	314 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	WTAP	Q15007	396 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	GSTA3	Q16772	222 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	RNASE12	Q5GAN4	147 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	CC2D1B	Q5T0F9	858 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	SNX30	Q5VWJ9	437 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	MTFR2	Q6P444	385 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM154	Q6P9G4	183 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	CYP20A1	Q6UW02	462 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	SERPINA13P	Q6UXR4	307 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	GSTA5	Q7RTV2	222 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	PXK	Q7Z7A4	578 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM200A	Q86VY9	491 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ADGRF3	Q8IZF5	1079 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	C1orf131	Q8NDD1	294 aa	Known RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	HSPH1	Q92598	858 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	KAT2B	Q92831	832 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	KLHL29	Q96CT2	875 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ELP4	Q96EB1	424 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	P2RY11	Q96G91	374 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	FEM1C	Q96JP0	617 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	GPR78	Q96P69	363 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	SERINC2	Q96SA4	455 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ARHGAP39	Q9C0H5	1083 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	NUAK2	Q9H093	628 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	GHITM	Q9H3K2	345 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ENTPD7	Q9NQZ7	604 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	ASNSD1	Q9NWL6	643 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	TNFSF13B	Q9Y275	285 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	PKP3	Q9Y446	797 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	A2M	P01023	1474 aa		4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	POLR1A	O95602	1720 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS8-223	ENST00000485024	STRCP1	A6NGW2	1772 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	DEPDC5	O75140	1603 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	HECW1	Q76N89	1606 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PTCH1	Q13635	1447 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	LY6G6E	A0A0G2JKS1	128 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	TEX13C	A0A0J9YWL9	993 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	C17orf113	A0A1B0GUU1	675 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	SYNDIG1L	A6NDD5	238 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	OR6C68	A6NDL8	312 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PRY	O14603	147 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PER2	O15055	1255 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	TNFSF14	O43557	240 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	DOK2	O60496	412 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	PTP4A3	O75365	173 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	BCAR3	O75815	825 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CHRM5	P08912	532 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	FPR3	P25089	353 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	HOXD13	P35453	343 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CPOX	P36551	454 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	GABRB2	P47870	512 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	MTNR1A	P48039	350 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CPA2	P48052	419 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	HARS2	P49590	506 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF84	P51523	738 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	YWHAZ	P63104	245 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	EFNB1	P98172	346 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CHAF1B	Q13112	559 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	AIMP2	Q13155	320 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC18A3	Q16572	532 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	ANXA2R	Q3ZCQ2	193 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	CERKL	Q49MI3	558 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	C10orf76	Q5T2E6	689 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	VWA5B1	Q5TIE3	1220 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	SARM1	Q6SZW1	724 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	C16orf54	Q6UWD8	224 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	IL20RB	Q6UXL0	311 aa		4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	MRPL10	Q7Z7H8	261 aa	Known RBP	4.14	□□□□□ -1.75
VPS8-223	ENST00000485024	MON1A	Q86VX9	555 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms