RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 CAPN6Q9Y6Q1 641 aa26.8■■□□□ 1.88
GTF3C4-202ENST00000483873 LRRK1Q38SD2 2015 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 A0A1W2PQU0 124 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 PCDH8O95206 1070 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 ZRANB2O95218 330 aaKnown RBP eCLIP26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 MX2P20592 715 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 RENBPP51606 427 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 NT5DC3Q86UY8 548 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 CCDC50Q8IVM0 306 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 RCOR2Q8IZ40 523 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 TEX26Q8N6G2 289 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 EXD1Q8NHP7 514 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 MAML1Q92585 1016 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 LGMNQ99538 433 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 MGME1Q9BQP7 344 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 SUV39H2Q9H5I1 410 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 NT5MQ9NPB1 228 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 PCDHA3Q9Y5H8 950 aa26.79■■□□□ 1.88
GTF3C4-202ENST00000483873 DCHS1Q96JQ0 3298 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 hCG_1818297A0A087WSY0 165 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 PRR5-ARHGAP8B1AHC4 643 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 WNT9AO14904 365 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 MATN3O15232 486 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 ZFXP17010 805 aaPredicted RBP26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 ITIH2P19823 946 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 CR2P20023 1033 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 CCNCP24863 283 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 CTNNA2P26232 953 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 ARHGAP8P85298 464 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 GRM3Q14832 879 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 RSPO4Q2I0M5 234 aaPredicted RBP26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 TFDP3Q5H9I0 405 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 FAM182AQ5T1J6 154 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 SEL1L3Q68CR1 1132 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 TIGD7Q6NT04 549 aaPredicted RBP26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 ZSWIM9Q86XI8 627 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 CCNYQ8ND76 341 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 RBM41Q96IZ5 413 aaKnown RBP26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 TUBGCP5Q96RT8 1024 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 ATP13A3Q9H7F0 1226 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 SAE1Q9UBE0 346 aaPredicted RBP26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 DKK3Q9UBP4 350 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 DNAH14Q0VDD8 3507 aa26.78■■□□□ 1.88
GTF3C4-202ENST00000483873 CST8O60676 142 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 FTCDO95954 541 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 CCDC175P0C221 793 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 TIMP2P16035 220 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 HSPA9P38646 679 aaKnown RBP26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 MAPK8P45983 427 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 CSNK1EP49674 416 aaKnown RBP26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 BNC1Q01954 994 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 HNRNPDQ14103 355 aaKnown RBP26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 B4GALNT4Q76KP1 1039 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 PRPF39Q86UA1 669 aaKnown RBP26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 HORMAD1Q86X24 394 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 BBS5Q8N3I7 341 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 OR2I1PQ8NGU4 316 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 RMDN1Q96DB5 314 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 OLFM3Q96PB7 478 aa26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 PACSIN2Q9UNF0 486 aaPredicted RBP26.77■■□□□ 1.88
GTF3C4-202ENST00000483873 TSPAN11A1L157 253 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 CDX4O14627 284 aaPredicted RBP26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 AP1G1O43747 822 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 PECAM1P16284 738 aaPredicted RBP26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 PRLRP16471 622 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 SERPINA4P29622 427 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 PEX5P50542 639 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 AP1S1P61966 158 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 PPIDQ08752 370 aaKnown RBP26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 GRIK2Q13002 908 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 TFDP2Q14188 446 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 STPG1Q5TH74 334 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 NEK5Q6P3R8 708 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 TTC7BQ86TV6 843 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 CCDC13Q8IYE1 715 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 NETO1Q8TDF5 533 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 ALG3Q92685 438 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 RAB7BQ96AH8 199 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 SERAC1Q96JX3 654 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 ZNF641Q96N77 438 aaPredicted RBP26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 NUDCD1Q96RS6 583 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 HERPUD2Q9BSE4 406 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 GTPBP2Q9BX10 602 aaKnown RBP26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 SCUBE2Q9NQ36 999 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 AMFRQ9UKV5 643 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 GUCA1BQ9UMX6 200 aa26.76■■□□□ 1.87
GTF3C4-202ENST00000483873 A0A1B0GVT2 93 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 CCDC66A2RUB6 948 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 KCNK1O00180 336 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 ARHGAP33O14559 1287 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 AREL1O15033 823 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 AFF3P51826 1226 aaKnown RBP26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 BCL2L1Q07817 233 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 ZNF284Q2VY69 593 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 TMEM259Q4ZIN3 620 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 PEX26Q7Z412 305 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 FATE1Q969F0 183 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 MYOCQ99972 504 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 HEMGNQ9BXL5 484 aa26.75■■□□□ 1.87
GTF3C4-202ENST00000483873 TSGA10Q9BZW7 698 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms