RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TRIM61Q5EBN2 209 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 CFAP58Q5T655 872 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 NPNTQ6UXI9 565 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 TRIM69Q86WT6 500 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 CAMK1DQ8IU85 385 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 PGBD5Q8N414 524 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 P3H4Q92791 437 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 OLFM3Q96PB7 478 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 NUDCD1Q96RS6 583 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 MGME1Q9BQP7 344 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 HEMGNQ9BXL5 484 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 SCUBE2Q9NQ36 999 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 RBM22Q9NW64 420 aaKnown RBP eCLIP21.15■□□□□ 0.98
SEC13-217ENST00000482647 AMACRQ9UHK6 382 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 SLC6A14Q9UN76 642 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 EFR3BQ9Y2G0 817 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 LAMA1P25391 3075 aa21.14■□□□□ 0.98
SEC13-217ENST00000482647 A0A1B0GTW7 788 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.14■□□□□ 0.97
SEC13-217ENST00000482647 A0A1W2PPC4 97 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 PATE3B3GLJ2 98 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 AP1G1O43747 822 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 PCDH8O95206 1070 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 SERPINF2P08697 491 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 NUDT1P36639 197 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 SUOXP51687 545 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 AP1B1Q10567 949 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 RALGPS1Q5JS13 557 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 TCEAL6Q6IPX3 200 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 SLC23A3Q6PIS1 610 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 BRAT1Q6PJG6 821 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 PRPF39Q86UA1 669 aaKnown RBP21.14■□□□□ 0.97
SEC13-217ENST00000482647 ZCCHC9Q8N567 271 aaKnown RBP21.14■□□□□ 0.97
SEC13-217ENST00000482647 C1orf216Q8TAB5 229 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 LRRN4Q8WUT4 740 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 ALG3Q92685 438 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 TCEAL3Q969E4 200 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 PDLIM2Q96JY6 352 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 NUSAP1Q9BXS6 441 aaKnown RBP21.14■□□□□ 0.97
SEC13-217ENST00000482647 OSBPL8Q9BZF1 889 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 NT5MQ9NPB1 228 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 PPP2R2CQ9Y2T4 447 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 FADS3Q9Y5Q0 445 aa21.14■□□□□ 0.97
SEC13-217ENST00000482647 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.14■□□□□ 0.97
SEC13-217ENST00000482647 NUMA1Q14980 2115 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 A0A1W2PQU0 124 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 NEMP1O14524 444 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 LATO43561 262 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 TSPAN6O43657 245 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 RNGTTO60942 597 aaKnown RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 TIMP2P16035 220 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 CR2P20023 1033 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 XPAP23025 273 aaPredicted RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 CES1P23141 567 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 PTPN7P35236 360 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 PPP2CBP62714 309 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 PPP2CAP67775 309 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 IRX4P78413 519 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 ADCY2Q08462 1091 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 ITKQ08881 620 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 CCDC181Q5TID7 509 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 BBS12Q6ZW61 710 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 PAF1Q8N7H5 531 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 HES6Q96HZ4 224 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 FEM1CQ96JP0 617 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 ALS2CR12Q96Q35 445 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 POLR1EQ9GZS1 481 aaKnown RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 NOD2Q9HC29 1040 aa21.13■□□□□ 0.97
SEC13-217ENST00000482647 SAE1Q9UBE0 346 aaPredicted RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 PACSIN2Q9UNF0 486 aaPredicted RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 NYNRINQ9P2P1 1898 aaKnown RBP21.13■□□□□ 0.97
SEC13-217ENST00000482647 TSPAN11A1L157 253 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 TTC24A2A3L6 582 aaPredicted RBP21.12■□□□□ 0.97
SEC13-217ENST00000482647 GJB3O75712 270 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 JCHAINP01591 159 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 PYGMP11217 842 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 AFF3P51826 1226 aaKnown RBP21.12■□□□□ 0.97
SEC13-217ENST00000482647 MAXP61244 160 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 POLR2LP62875 67 aaKnown RBP21.12■□□□□ 0.97
SEC13-217ENST00000482647 RPS21P63220 83 aaKnown RBP21.12■□□□□ 0.97
SEC13-217ENST00000482647 ARHGAP8P85298 464 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 AASDHQ4L235 1098 aaPredicted RBP21.12■□□□□ 0.97
SEC13-217ENST00000482647 HORMAD1Q86X24 394 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 ORAI3Q9BRQ5 295 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 DMTF1Q9Y222 760 aa21.12■□□□□ 0.97
SEC13-217ENST00000482647 A0A1W2PQ67 120 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 KCNK1O00180 336 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 DDX3YO15523 660 aaKnown RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 TJP3O95049 919 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 PECAM1P16284 738 aaPredicted RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 MAT2AP31153 395 aaKnown RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 ABL2P42684 1182 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 IFI35P80217 286 aaPredicted RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 TEAD4Q15561 434 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 UGP2Q16851 508 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 SETMARQ53H47 684 aaPredicted RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 KIAA1161Q6NSJ0 714 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 TFB1MQ8WVM0 346 aaKnown RBP21.11■□□□□ 0.97
SEC13-217ENST00000482647 SEMA3CQ99985 751 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms