RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 BPIFB6Q8NFQ5 453 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 GAB3Q8WWW8 586 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ZFP42Q96MM3 310 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 RHOBTB2Q9BYZ6 727 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 MID1IP1Q9NPA3 183 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ADAM28Q9UKQ2 775 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 CNOT6Q9ULM6 557 aaKnown RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 OCM2P0CE71 109 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 OCMP0CE72 109 aaPredicted RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 MAGEA3P43357 314 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 C21orf59P57076 290 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 SAMD4BQ5PRF9 694 aaKnown RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 OGFOD2Q6N063 350 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 SCN4BQ8IWT1 228 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 NPWQ8N729 165 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 RNF145Q96MT1 663 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 CXorf21Q9HAI6 301 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ZCWPW2A0A1B0GU75 182 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 TCAF2A6NFQ2 919 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 H2AFYO75367 372 aaKnown RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 SIX3O95343 332 aaPredicted RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 C22orf31O95567 290 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 LINC00032P0C843 101 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 CPB1P15086 417 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 FASP25445 335 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 NUP107P57740 925 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 GRM2Q14416 872 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 PFKFB4Q16877 469 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 TMEM26Q6ZUK4 368 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 ESAMQ96AP7 390 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
VPS52-218ENST00000482399 MRPL40Q9NQ50 206 aaKnown RBP12.82□□□□□ -0.36
VPS52-218ENST00000482399 CEP350Q5VT06 3117 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 TRIP11Q15643 1979 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 CENPFP49454 3210 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 A0A087WXM4 84 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 DHRS12A0PJE2 317 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 OR51F1A6NGY5 319 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 DYNC1LI2O43237 492 aaPredicted RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 KCNH1O95259 989 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 SLC35E2BP0CK96 405 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 NFKBIAP25963 317 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 PRDX6P30041 224 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 NAB1Q13506 487 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 NFYCQ13952 458 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 AGAP9Q5VTM2 703 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 STEAP4Q687X5 459 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 CHSY3Q70JA7 882 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ZNF554Q86TJ5 538 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ZDHHC17Q8IUH5 632 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 BLOC1S5Q8TDH9 187 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 PKD2L2Q9NZM6 624 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 MPP6Q9NZW5 540 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 CPA4Q9UI42 421 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 OAZ3Q9UMX2 235 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 DGKBQ9Y6T7 804 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 EVPLQ92817 2033 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ZBTB42B2RXF5 422 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 H3BMM5 538 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 SOCS2O14508 198 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 DPYSL4O14531 572 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 LRIG2O94898 1065 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 HMBSP08397 361 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 SLC1A2P43004 574 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 GHRHRQ02643 423 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 GNA12Q03113 381 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 CDK18Q07002 472 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 INCA1Q0VD86 236 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 CBX3Q13185 183 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 ADRM1Q16186 407 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 GPR158Q5T848 1215 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 DNAJC14Q6Y2X3 702 aaPredicted RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 STRADAQ7RTN6 431 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 VPS33AQ96AX1 596 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 C12orf43Q96C57 262 aaKnown RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 ZNF560Q96MR9 790 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 C1orf50Q9BV19 199 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 SLC25A23Q9BV35 468 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 NT5MQ9NPB1 228 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 SEMA4BQ9NPR2 832 aaPredicted RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 CACNA2D2Q9NY47 1150 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
VPS52-218ENST00000482399 UBQLN1Q9UMX0 589 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms