RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 K7ESM1 405 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 FGF10O15520 208 aaPredicted RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 CSF2P04141 144 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 SKILP12757 684 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 IGFALSP35858 605 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 PFN3P60673 137 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 HNRNPKP61978 463 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLK1-211ENST00000481641 RAD51Q06609 339 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 CAVIN1Q6NZI2 390 aaKnown RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 PDZD3Q86UT5 571 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 PARGQ86W56 976 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 ZNF548Q8NEK5 533 aaPredicted RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 CXorf40AQ8TE69 158 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 ASB12Q8WXK4 309 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 RFFLQ8WZ73 363 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 CENPTQ96BT3 561 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 NXPE2Q96DL1 559 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 CRELD1Q96HD1 420 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 VCPIP1Q96JH7 1222 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 SNRNP25Q9BV90 132 aaKnown RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 SLC39A8Q9C0K1 460 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 TCEAL2Q9H3H9 227 aaPredicted RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 PDFQ9HBH1 243 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 MBNL1Q9NR56 388 aaKnown RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 PNMA8BQ9ULN7 279 aaPredicted RBP18.78■□□□□ 0.6
CLK1-211ENST00000481641 CLCA2Q9UQC9 943 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 COQ6Q9Y2Z9 468 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 MFHAS1Q9Y4C4 1052 aa18.78■□□□□ 0.6
CLK1-211ENST00000481641 TMEM191CA6NGB0 347 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 EEF2KO00418 725 aaKnown RBP18.77■□□□□ 0.6
CLK1-211ENST00000481641 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLK1-211ENST00000481641 TLX3O43711 291 aaPredicted RBP18.77■□□□□ 0.6
CLK1-211ENST00000481641 MT-CO3P00414 261 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
CLK1-211ENST00000481641 ALPPL2P10696 532 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 CKMT1AP12532 417 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 NME1P15531 152 aaKnown RBP18.77■□□□□ 0.6
CLK1-211ENST00000481641 JUNDP17535 347 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 PAPOLAP51003 745 aaKnown RBP18.77■□□□□ 0.6
CLK1-211ENST00000481641 KLHL40Q2TBA0 621 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 ZSCAN30Q86W11 494 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 RBFAQ8N0V3 343 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 DENND6BQ8NEG7 585 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 LMX1AQ8TE12 382 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 ARHGEF26Q96DR7 871 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 NCAPGQ9BPX3 1015 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 DKK3Q9UBP4 350 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 LRRK1Q38SD2 2015 aa18.77■□□□□ 0.6
CLK1-211ENST00000481641 ASXL3Q9C0F0 2248 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 NEMP2A6NFY4 417 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 BUB1BO60566 1050 aaPredicted RBP18.76■□□□□ 0.59
CLK1-211ENST00000481641 PRAMEF11O60813 436 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 TM7SF2O76062 418 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 PRKCGP05129 697 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 DESP17661 470 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 MIPP30301 263 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 RGRP47804 291 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 ZNF165P49910 485 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 E2F1Q01094 437 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 C1orf61Q13536 156 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 DEFB133Q30KQ1 61 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 FILIP1LQ4L180 1135 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 ERMARDQ5T6L9 678 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 ARHGAP36Q6ZRI8 547 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 CYP4V2Q6ZWL3 525 aaPredicted RBP18.76■□□□□ 0.59
CLK1-211ENST00000481641 DCBLD1Q8N8Z6 715 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 TP53I13Q8NBR0 393 aaPredicted RBP18.76■□□□□ 0.59
CLK1-211ENST00000481641 CPEB1Q9BZB8 566 aaKnown RBP18.76■□□□□ 0.59
CLK1-211ENST00000481641 AIPL1Q9NZN9 384 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 MYO1AQ9UBC5 1043 aa18.76■□□□□ 0.59
CLK1-211ENST00000481641 CNOT8Q9UFF9 292 aaKnown RBP18.76■□□□□ 0.59
CLK1-211ENST00000481641 A0A1B0GTH6 734 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 H3BM21 787 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 DAPK3O43293 454 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 AQP9O43315 295 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 OPA1O60313 960 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 ERCC2P18074 760 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 XPAP23025 273 aaPredicted RBP18.75■□□□□ 0.59
CLK1-211ENST00000481641 NDST2P52849 883 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 KLHL30Q0D2K2 578 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 RTP5Q14D33 572 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 PPP6R3Q5H9R7 873 aaPredicted RBP18.75■□□□□ 0.59
CLK1-211ENST00000481641 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 CAMK1DQ8IU85 385 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 ARHGAP12Q8IWW6 846 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 TP53INP2Q8IXH6 220 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 FAM181AQ8N9Y4 354 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 ZNF653Q96CK0 615 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 NRSN2Q9GZP1 204 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 SUV39H2Q9H5I1 410 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 PCDH12Q9NPG4 1184 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 SCUBE2Q9NQ36 999 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 PCDHB1Q9Y5F3 818 aa18.75■□□□□ 0.59
CLK1-211ENST00000481641 A0A087WV48 116 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 A0A1W2PQC6 194 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 ARHGAP42A6NI28 874 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 DFFAO00273 331 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 GCATO75600 419 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 ITPKBP27987 946 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 HTR7P34969 479 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms