RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 NCAPGQ9BPX3 1015 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 CPEB1Q9BZB8 566 aaKnown RBP23.76■■□□□ 1.39
TTC3-217ENST00000481605 PDFQ9HBH1 243 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 NLGN3Q9NZ94 848 aa23.76■■□□□ 1.39
TTC3-217ENST00000481605 CNOT8Q9UFF9 292 aaKnown RBP23.76■■□□□ 1.39
TTC3-217ENST00000481605 TDRD6O60522 2096 aaKnown RBP23.75■■□□□ 1.39
TTC3-217ENST00000481605 EIF3CLB5ME19 914 aaKnown RBP23.75■■□□□ 1.39
TTC3-217ENST00000481605 SCAMP1O15126 338 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 MMP20O60882 483 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 PIGNO95427 931 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 NME1P15531 152 aaKnown RBP23.75■■□□□ 1.39
TTC3-217ENST00000481605 TIMP2P16035 220 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 ITIH2P19823 946 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 PFN3P60673 137 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 NR1I3Q14994 352 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 TPRG1LQ5T0D9 272 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 CXorf40AQ8TE69 158 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 FNIP1Q8TF40 1166 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 CENPTQ96BT3 561 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 ZNF653Q96CK0 615 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 EIF3CQ99613 913 aaKnown RBP23.75■■□□□ 1.39
TTC3-217ENST00000481605 FUCA2Q9BTY2 467 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 SLC39A8Q9C0K1 460 aa23.75■■□□□ 1.39
TTC3-217ENST00000481605 ANKRD11Q6UB99 2663 aaPredicted RBP23.75■■□□□ 1.39
TTC3-217ENST00000481605 H3BM21 787 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 DAPK3O43293 454 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 PRPSAP2O60256 369 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 PRAMEF11O60813 436 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 NEBLO76041 1014 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 TM7SF2O76062 418 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 SKILP12757 684 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 MIPP30301 263 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 PAPOLAP51003 745 aaKnown RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 INSM1Q01101 510 aaPredicted RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 VPS36Q86VN1 386 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 RFFLQ8WZ73 363 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 NXPE2Q96DL1 559 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 KCTD15Q96SI1 283 aaPredicted RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 KLF15Q9UIH9 416 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 FAM208BQ5VWN6 2430 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 ARHGAP42A6NI28 874 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 CKMT1AP12532 417 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 XPAP23025 273 aaPredicted RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 E2F1Q01094 437 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 RFX8Q6ZV50 586 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 CYP4V2Q6ZWL3 525 aaPredicted RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 ZNF548Q8NEK5 533 aaPredicted RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 APOLD1Q96LR9 279 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 WRAP53Q9BUR4 548 aaKnown RBP23.74■■□□□ 1.39
TTC3-217ENST00000481605 DUSP23Q9BVJ7 150 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 EDEM3Q9BZQ6 932 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 MYO1AQ9UBC5 1043 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 CLCA2Q9UQC9 943 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 SCINQ9Y6U3 715 aa23.74■■□□□ 1.39
TTC3-217ENST00000481605 K7ESM1 405 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 MYF5P13349 255 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 JUNDP17535 347 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 IGFALSP35858 605 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 PPP6R3Q5H9R7 873 aaPredicted RBP23.73■■□□□ 1.39
TTC3-217ENST00000481605 HNRNPLLQ8WVV9 542 aaKnown RBP23.73■■□□□ 1.39
TTC3-217ENST00000481605 C1QTNF7Q9BXJ2 289 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 SUV39H2Q9H5I1 410 aa23.73■■□□□ 1.39
TTC3-217ENST00000481605 KNTC1P50748 2209 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 LRCH4O75427 683 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 ERCC2P18074 760 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 EIF2B5Q13144 721 aaKnown RBP23.72■■□□□ 1.39
TTC3-217ENST00000481605 GRM3Q14832 879 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 COL28A1Q2UY09 1125 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 FAM181AQ8N9Y4 354 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 HCAR2Q8TDS4 363 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 TRIM11Q96F44 468 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 MBNL1Q9NR56 388 aaKnown RBP23.72■■□□□ 1.39
TTC3-217ENST00000481605 AK5Q9Y6K8 562 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 APC2O95996 2303 aa23.72■■□□□ 1.39
TTC3-217ENST00000481605 NBEAQ8NFP9 2946 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 AQP9O43315 295 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 PALMO75781 387 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 MYBL1P10243 752 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 SUOXP51687 545 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 THOP1P52888 689 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 ELP6Q0PNE2 266 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 PTK2BQ14289 1009 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 FIGNQ5HY92 759 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 CFAP58Q5T655 872 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 AFMIDQ63HM1 303 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 PSTKQ8IV42 348 aaKnown RBP23.71■■□□□ 1.39
TTC3-217ENST00000481605 ARHGAP12Q8IWW6 846 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 CACTIN-AS1Q8N1I8 211 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 TP53I13Q8NBR0 393 aaPredicted RBP23.71■■□□□ 1.39
TTC3-217ENST00000481605 TSEN2Q8NCE0 465 aaKnown RBP23.71■■□□□ 1.39
TTC3-217ENST00000481605 NRSN2Q9GZP1 204 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 ISCUQ9H1K1 167 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 MRPL47Q9HD33 250 aaKnown RBP23.71■■□□□ 1.39
TTC3-217ENST00000481605 CSNK1G3Q9Y6M4 447 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 ACACAQ13085 2346 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 ADAMTS20P59510 1910 aa23.71■■□□□ 1.39
TTC3-217ENST00000481605 LY6G6EA0A0G2JKS1 128 aa23.7■■□□□ 1.38
TTC3-217ENST00000481605 SYCE3A1L190 88 aa23.7■■□□□ 1.38
TTC3-217ENST00000481605 DFFAO00273 331 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms