RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 HMCESQ96FZ2 354 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 TTYH3Q9C0H2 523 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 IPO11Q9UI26 975 aaKnown RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 SALL4Q9UJQ4 1053 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 J3KR12 359 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 MUSKO15146 869 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 EFSO43281 561 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 CCP110O43303 1012 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 RAMP2O60895 175 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 PIGNO95427 931 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 KRT3P12035 628 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 EIF4A3P38919 411 aaKnown RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 CA9Q16790 459 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 KLHL40Q2TBA0 621 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 WSCD2Q2TBF2 565 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 C3orf38Q5JPI3 329 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ACBD5Q5T8D3 534 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ARHGAP40Q5TG30 622 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 MON1BQ7L1V2 547 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 TP53INP2Q8IXH6 220 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF248Q8NDW4 579 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 FAM174AQ8TBP5 190 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 NTAN1Q96AB6 310 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 VCPIP1Q96JH7 1222 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-212ENST00000480836 SLC46A1Q96NT5 459 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 DEPDC7Q96QD5 511 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 LGMNQ99538 433 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 DUSP23Q9BVJ7 150 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 GPATCH2LQ9NWQ4 482 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 ADAM22Q9P0K1 906 aa13.46□□□□□ -0.25
PTPN7-212ENST00000480836 CXorf51AA0A1B0GTR3 108 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SIGLEC16A6NMB1 481 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
PTPN7-212ENST00000480836 RASA4BC9J798 803 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 TK2O00142 265 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 NEMP1O14524 444 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 TPP1O14773 563 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 RASA4O43374 803 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 ALPPL2P10696 532 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 GM2AP17900 193 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 GPD1P21695 349 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SRSF6Q13247 344 aaKnown RBP13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SERINC3Q13530 473 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 IRF4Q15306 451 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SYCP1Q15431 976 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 ARL13BQ3SXY8 428 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 TMEM52BQ4KMG9 183 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 SLFN11Q7Z7L1 901 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 B3GNT8Q7Z7M8 397 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
PTPN7-212ENST00000480836 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 RAB7BQ96AH8 199 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 EPAS1Q99814 870 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 PDFQ9HBH1 243 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 TAS2R14Q9NYV8 317 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 MFHAS1Q9Y4C4 1052 aa13.45□□□□□ -0.26
PTPN7-212ENST00000480836 TEX51A0A1B0GUA7 166 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 A0A1W2PQM1 296 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 LMO7DNF2Z398 122 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 NTN3O00634 580 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 KLK10O43240 276 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 CREB3O43889 395 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 TM7SF2O76062 418 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 PLA2G2AP14555 144 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 EPHB2P29323 1055 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 DUSP3P51452 185 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 COPB1P53618 953 aaKnown RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 GSCP56915 257 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 PCBP4P57723 403 aaKnown RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 LY6DQ14210 128 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 C6orf132Q5T0Z8 1188 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 ARHGAP36Q6ZRI8 547 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 TTC9Q92623 222 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 CELF6Q96J87 481 aaKnown RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 CCDC3Q9BQI4 270 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms