RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 BMFQ96LC9 184 aa15.2■□□□□ 0.02
TDP2-205ENST00000480495 ZNF641Q96N77 438 aaPredicted RBP15.2■□□□□ 0.02
TDP2-205ENST00000480495 TUBGCP5Q96RT8 1024 aa15.2■□□□□ 0.02
TDP2-205ENST00000480495 SUV39H2Q9H5I1 410 aa15.2■□□□□ 0.02
TDP2-205ENST00000480495 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.2■□□□□ 0.02
TDP2-205ENST00000480495 NENFQ9UMX5 172 aa15.2■□□□□ 0.02
TDP2-205ENST00000480495 ITM2BQ9Y287 266 aa15.2■□□□□ 0.02
TDP2-205ENST00000480495 TSPAN11A1L157 253 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 DFFAO00273 331 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 INSIG1O15503 277 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 SPINT1O43278 529 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TPM1P09493 284 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 C1SP09871 688 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 RARAP10276 462 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 CDK4P11802 303 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TCF4P15884 667 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TIMP2P16035 220 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 XPAP23025 273 aaPredicted RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 EIF4A3P38919 411 aaKnown RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 NSUN2Q08J23 767 aaKnown RBP eCLIP15.19■□□□□ 0.02
TDP2-205ENST00000480495 ELP6Q0PNE2 266 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 SMTNL2Q2TAL5 461 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TMCO4Q5TGY1 634 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 TMPRSS7Q7RTY8 843 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 PTAR1Q7Z6K3 402 aaPredicted RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 GALNT15Q8N3T1 639 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 NPWQ8N729 165 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 CXorf40AQ8TE69 158 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 BTBD6Q96KE9 485 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 ZNF599Q96NL3 588 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 CSPG4P5Q96PW8 444 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 KLF6Q99612 283 aaPredicted RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 DNAJC7Q99615 494 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 CINPQ9BW66 212 aaPredicted RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 C1QTNF7Q9BXJ2 289 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 GPR27Q9NS67 375 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 ZNHIT6Q9NWK9 470 aaKnown RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 IPO11Q9UI26 975 aaKnown RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 LCMT1Q9UIC8 334 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
TDP2-205ENST00000480495 COL5A1P20908 1838 aaPredicted RBP15.19■□□□□ 0.02
TDP2-205ENST00000480495 SSU72P8A0A1W2PR75 194 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 POM121BA6NF01 834 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 RAD51BO15315 384 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 PIGNO95427 931 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 RENBPP51606 427 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 SLC25A11Q02978 314 aaKnown RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 SLC18A3Q16572 532 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 TMEM52BQ4KMG9 183 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 CFAP58Q5T655 872 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 BRAT1Q6PJG6 821 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 SRLQ86TD4 932 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 SLC22A18ASQ8N1D0 253 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 TSEN2Q8NCE0 465 aaKnown RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 ZNF564Q8TBZ8 553 aaPredicted RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 ATP13A3Q9H7F0 1226 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 UVRAGQ9P2Y5 699 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 SEPT3Q9UH03 358 aa15.18■□□□□ 0.02
TDP2-205ENST00000480495 MAP1BP46821 2468 aaKnown RBP15.18■□□□□ 0.02
TDP2-205ENST00000480495 TP53BP1Q12888 1972 aaPredicted RBP15.17■□□□□ 0.02
TDP2-205ENST00000480495 SPTY2D1-AS1A0A0U1RR47 76 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 TOR1BO14657 336 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 BUB1BO60566 1050 aaPredicted RBP15.17■□□□□ 0.02
TDP2-205ENST00000480495 TM7SF2O76062 418 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 AMPD1P23109 780 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 DGKAP23743 735 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 SERPINA4P29622 427 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 SERPINB6P35237 376 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.02
TDP2-205ENST00000480495 UGP2Q16851 508 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 LRRC73Q5JTD7 316 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 TXNRD3NBQ6F5E7 133 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 ARHGAP36Q6ZRI8 547 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 CTNNBL1Q8WYA6 563 aaPredicted RBP15.17■□□□□ 0.02
TDP2-205ENST00000480495 TSC1Q92574 1164 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 CENPTQ96BT3 561 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 PSKH2Q96QS6 385 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 DEF6Q9H4E7 631 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 ETNK2Q9NVF9 386 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
TDP2-205ENST00000480495 MMP20O60882 483 aa15.16■□□□□ 0.02
TDP2-205ENST00000480495 SDC3O75056 442 aa15.16■□□□□ 0.02
TDP2-205ENST00000480495 RFPL3O75679 317 aa15.16■□□□□ 0.02
TDP2-205ENST00000480495 PIAS2O75928 621 aa15.16■□□□□ 0.02
TDP2-205ENST00000480495 CKMT2P17540 419 aa15.16■□□□□ 0.02
TDP2-205ENST00000480495 HSPA9P38646 679 aaKnown RBP15.16■□□□□ 0.02
TDP2-205ENST00000480495 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
TDP2-205ENST00000480495 RGRP47804 291 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms