RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCDC14Q49A88 953 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 BOLA3Q53S33 107 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 INO80DQ53TQ3 878 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MBLAC2Q68D91 279 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CXorf57Q6NSI4 855 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 NEK5Q6P3R8 708 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TPGS1Q6ZTW0 290 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ASCL5Q7RTU5 278 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 LUZP1Q86V48 1076 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 NLRP14Q86W24 1093 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CNGA4Q8IV77 575 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 VSTM4Q8IW00 320 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CCAR2Q8N163 923 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 UMODL1-AS1Q8N2C9 162 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ALLCQ8N6M5 410 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MDGA1Q8NFP4 955 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 OR8K1Q8NGG5 319 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CEP76Q8TAP6 659 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 FAM71BQ8TC56 605 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TEKT4Q8WW24 435 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 FAM168AQ92567 244 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 FATE1Q969F0 183 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 FEM1AQ9BSK4 669 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ASPNQ9BXN1 380 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ACE2Q9BYF1 805 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ZDHHC5Q9C0B5 715 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ZYG11BQ9C0D3 744 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 RSPH9Q9H1X1 276 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MAGEH1Q9H213 219 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TRIT1Q9H3H1 467 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TSPY26PQ9H489 355 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 HAUS4Q9H6D7 363 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 FAM204AQ9H8W3 233 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SGK2Q9HBY8 427 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 VPS45Q9NRW7 570 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PIGVQ9NUD9 493 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ABCB8Q9NUT2 735 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TMEM248Q9NWD8 314 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 UVRAGQ9P2Y5 699 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SUSD2Q9UGT4 822 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 GMEB2Q9UKD1 530 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 NUDT5Q9UKK9 219 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 STON1Q9Y6Q2 735 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TCF20Q9UGU0 1960 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TCHHQ07283 1943 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 EDDM13A0A1B0GTR0 161 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 BCLAF3A2AJT9 711 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 DDX3XO00571 662 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RGS13O14921 159 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 MCF2LO15068 1137 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TBL1XO60907 577 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 LCA5LO95447 670 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ESR1P03372 595 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CYP1A2P05177 515 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TPM1P09493 284 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 PNMA6AP0CW24 399 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 GABRG2P18507 467 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 GPD1P21695 349 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 C5AR1P21730 350 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TPP2P29144 1249 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CD6P30203 668 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 DNAJA1P31689 397 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 IL12RB1P42701 662 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 KLK7P49862 253 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SULT1E1P49888 294 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SUOXP51687 545 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CDR1P51861 262 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 NDST2P52849 883 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 COPAP53621 1224 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ST8SIA6P61647 398 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RPS24P62847 133 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF33AQ06730 810 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 OVGP1Q12889 678 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 LMAN2Q12907 356 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TBX2Q13207 712 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SLC14A1Q13336 389 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 HNRNPDQ14103 355 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SIM2Q14190 667 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 GRM3Q14832 879 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ASIC2Q16515 512 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 DPYSL2Q16555 572 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 PARP15Q460N3 678 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TTC31Q49AM3 519 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 C2orf27AQ580R0 203 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 HSP90AA4PQ58FG1 418 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RALGPS1Q5JS13 557 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 LRRC38Q5VT99 294 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 FAM46CQ5VWP2 391 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 EGFLAMQ63HQ2 1017 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 NAIF1Q69YI7 327 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 OGFOD2Q6N063 350 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TRNP1Q6NT89 227 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms