RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 ZSCAN5DPP0CG00 497 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 HOXB2P14652 356 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 IVDP26440 423 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 AVPR2P30518 371 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 CCNHP51946 323 aaPredicted RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 DGKEP52429 567 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 SKOR1P84550 965 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 SATB1Q01826 763 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 DSC2Q02487 901 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 RAD51Q06609 339 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 CKAP4Q07065 602 aaKnown RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 ZNF235Q14590 738 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 GRM3Q14832 879 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 SLC14A2Q15849 920 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 C4orf22Q6V702 233 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 PRUNE1Q86TP1 453 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 ALYREFQ86V81 257 aaKnown RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 TMPRSS6Q8IU80 811 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 MMGT1Q8N4V1 131 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 FBXL6Q8N531 539 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 OR2T3Q8NH03 318 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 GRK7Q8WTQ7 553 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 IMP4Q96G21 291 aaKnown RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 LRIG1Q96JA1 1093 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 RUNDC3BQ96NL0 473 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 POLR1EQ9GZS1 481 aaKnown RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 MKRN2Q9H000 416 aaKnown RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 RSPH9Q9H1X1 276 aaPredicted RBP9.7□□□□□ -0.86
CD46-214ENST00000480003 SUV39H2Q9H5I1 410 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 SARDHQ9UL12 918 aa9.7□□□□□ -0.86
CD46-214ENST00000480003 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 K7ESF4 209 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 FZD6O60353 706 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 SYNCRIPO60506 623 aaKnown RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 LEFTY1O75610 366 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 IGSF6O95976 241 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 MT-CYBP00156 380 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 IFNB1P01574 187 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 KRT14P02533 472 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 NFKB1P19838 968 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 HOXA6P31267 233 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 GKP32189 559 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 MAPK8P45983 427 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 RECQLP46063 649 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 CXCL12P48061 93 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 AP1S1P61966 158 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 RPS14P62263 151 aaKnown RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 ITKQ08881 620 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 ELAVL3Q14576 367 aaKnown RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 STARD3Q14849 445 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 KCTD11Q693B1 232 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 KDELC1Q6UW63 502 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 CAMK1DQ8IU85 385 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 MMAAQ8IVH4 418 aaKnown RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 KLHL7Q8IXQ5 586 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 CAMKK1Q8N5S9 505 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 TMEM105Q8N8V8 129 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 SPATA22Q8NHS9 363 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 PIP4K2CQ8TBX8 421 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 SHROOM3Q8TF72 1996 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 OR8D1Q8WZ84 308 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 ECHDC3Q96DC8 303 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 OXNAD1Q96HP4 312 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 EXOC2Q96KP1 924 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 CCDC114Q96M63 670 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 ZNF641Q96N77 438 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 TUBGCP5Q96RT8 1024 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 RBM15Q96T37 977 aaKnown RBP eCLIP9.69□□□□□ -0.862e-10■■■■□ 23.5
CD46-214ENST00000480003 KRT12Q99456 494 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 MLPHQ9BV36 600 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 VPS45Q9NRW7 570 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 PAK5Q9P286 719 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 KLHL8Q9P2G9 620 aaPredicted RBP9.69□□□□□ -0.86
CD46-214ENST00000480003 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 IL36AQ9UHA7 158 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 FAM153AQ9UHL3 310 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 PPIL1Q9Y3C6 166 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 PCDHGC4Q9Y5F7 938 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 TRIOO75962 3097 aa9.69□□□□□ -0.86
CD46-214ENST00000480003 LOC285095A0A1B0GVY8 99 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 TSPAN11A1L157 253 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 CTAGE15A4D2H0 777 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 BNIP3LO60238 219 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 NEBLO76041 1014 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 STK10O94804 968 aaKnown RBP9.68□□□□□ -0.86
CD46-214ENST00000480003 ECEL1O95672 775 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 AVPP01185 164 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 EPOP01588 193 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 PRNPP04156 253 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 SERPINF2P08697 491 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 CTAGE8P0CG41 777 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 TDGF1P13385 188 aa9.68□□□□□ -0.86
CD46-214ENST00000480003 TIMP2P16035 220 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms