RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 WDR27A2RRH5 827 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 LRCH4O75427 683 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 VIPP01282 170 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 LMNAP02545 664 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 SHBGP04278 402 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SLC35G4P0C7Q5 338 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 OR56A5P0C7T3 313 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 HOXD8P13378 290 aaPredicted RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 PROZP22891 400 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ASPAP45381 313 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MAPKAPK2P49137 400 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ILF2Q12905 390 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 NAB1Q13506 487 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 DPYSL3Q14195 570 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 TCEA2Q15560 299 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 IMPG1Q17R60 797 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MARCH8Q5T0T0 291 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 EXOC3L1Q86VI1 746 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 HID1Q8IV36 788 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 AGGF1Q8N302 714 aaeCLIP6.02□□□□□ -1.45
CPS1-207ENST00000479988 ZSCAN1Q8NBB4 408 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SCAMP5Q8TAC9 235 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SMG9Q9H0W8 520 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 ZBP1Q9H171 429 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SSU72Q9NP77 194 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 SPHK2Q9NRA0 654 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 DNAJC28Q9NX36 388 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 GPN3Q9UHW5 284 aaPredicted RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 TRMT6Q9UJA5 497 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 FBXW11Q9UKB1 542 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SLC13A4Q9UKG4 626 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ARFGEF1Q9Y6D6 1849 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 TCRBV7S2A1N4TA0A589 114 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 LCHNA4D1U4 455 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 C5orf60A6NFR6 353 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 A8MX80 341 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ZNF487B1APH4 448 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 PIRO00625 290 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 VPS26AO75436 327 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 DLDP09622 509 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 ZNF7P17097 686 aaPredicted RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 DRD4P21917 467 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 FGFR3P22607 806 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 AMPD1P23109 780 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 HOXA9P31269 272 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 PTPN9P43378 593 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 NEK3P51956 506 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 GNA12Q03113 381 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 INCA1Q0VD86 236 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 DLG2Q15700 870 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 GLT6D1Q7Z4J2 308 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ANKMY2Q8IV38 441 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MMAAQ8IVH4 418 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 FBXO36Q8NEA4 188 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ZNF398Q8TD17 642 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 KIAA1143Q96AT1 154 aaPredicted RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 FAM122AQ96E09 287 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 KLHDC7BQ96G42 594 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MAGEB10Q96LZ2 347 aaPredicted RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 PANX3Q96QZ0 392 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SLC2A11Q9BYW1 496 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 CCSER2Q9H7U1 834 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MIOSQ9NXC5 875 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 RAD54BQ9Y620 910 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 NUMBLQ9Y6R0 609 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 F5P12259 2224 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 POLR2AP24928 1970 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 OPHN1O60890 802 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ADH1BP00325 375 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 PPARDQ03181 441 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 NOMO1Q15155 1222 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 LYSMD4Q5XG99 296 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SLC26A9Q7LBE3 791 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 GALNT13Q8IUC8 556 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 KIRREL3Q8IZU9 778 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 SLC35B2Q8TB61 432 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 TFAP2BQ92481 460 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 RILPQ96NA2 401 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 GDF15Q99988 308 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 FAM118BQ9BPY3 351 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 FICDQ9BVA6 458 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 ACSS3Q9H6R3 686 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 PTPRHQ9HD43 1115 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 KLC4Q9NSK0 619 aa6.02□□□□□ -1.45
CPS1-207ENST00000479988 MTO1Q9Y2Z2 717 aaKnown RBP6.02□□□□□ -1.45
CPS1-207ENST00000479988 CCDC22O60826 627 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 TM7SF2O76062 418 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 MAP3K6O95382 1288 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 ECHS1P30084 290 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 RPL22P35268 128 aaKnown RBP6.01□□□□□ -1.45
CPS1-207ENST00000479988 GCKP35557 465 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 GPD2P43304 727 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 ARFIP2P53365 341 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 KLF1Q13351 362 aaPredicted RBP6.01□□□□□ -1.45
CPS1-207ENST00000479988 ATP13A4Q4VNC1 1196 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 FAM133BQ5BKY9 247 aaKnown RBP6.01□□□□□ -1.45
CPS1-207ENST00000479988 RASSF3Q86WH2 238 aa6.01□□□□□ -1.45
CPS1-207ENST00000479988 TXNDC5Q8NBS9 432 aaKnown RBP6.01□□□□□ -1.45
CPS1-207ENST00000479988 ZFYVE19Q96K21 471 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms