RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 UGT2B4P06133 528 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 TGM2P21980 687 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 SERPINA4P29622 427 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 DEKP35659 375 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 PEX5P50542 639 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 POLR2LP62875 67 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 RPS21P63220 83 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 GBE1Q04446 702 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 PPIDQ08752 370 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 SLC10A2Q12908 348 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 ZNF235Q14590 738 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 PDK1Q15118 436 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 SF3A2Q15428 464 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 TEAD4Q15561 434 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 SETMARQ53H47 684 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 IL27RAQ6UWB1 636 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 MFSD7Q6UXD7 560 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 PARS2Q7L3T8 475 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 HORMAD1Q86X24 394 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 SKA1Q96BD8 255 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 KLHL32Q96NJ5 620 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 KLHL11Q9NVR0 708 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 HYOU1Q9Y4L1 999 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.65■□□□□ 0.1
C9orf3-217ENST00000479161 PLXNA2O75051 1894 aa15.65■□□□□ 0.1
C9orf3-217ENST00000479161 GRID2IPA4D2P6 1211 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 SLC30A4O14863 429 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 VILLO15195 856 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 HTRA2O43464 458 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-217ENST00000479161 DFNA5O60443 496 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 MAOBP27338 520 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 MMP13P45452 471 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 RGRP47804 291 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 NAP1L1P55209 391 aaKnown RBP15.64■□□□□ 0.09
C9orf3-217ENST00000479161 ELP6Q0PNE2 266 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 AASDHQ4L235 1098 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-217ENST00000479161 NAPEPLDQ6IQ20 393 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 SPOCD1Q6ZMY3 1216 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 NT5DC3Q86UY8 548 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 OR6K2Q8NGY2 324 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-217ENST00000479161 LENG8Q96PV6 779 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-217ENST00000479161 RTKNQ9BST9 563 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 GOLPH3Q9H4A6 298 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 TM9SF3Q9HD45 589 aa15.64■□□□□ 0.09
C9orf3-217ENST00000479161 CACNA1AO00555 2505 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ADAMTS9Q9P2N4 1935 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 hCG_1818297A0A087WSY0 165 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 FAM47DPA6NHR8 397 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 UPK3BL1B0FP48 263 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 PATE3B3GLJ2 98 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 UPK3BL2E5RIL1 263 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 PRAMEF26H0Y7S4 382 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 TRAFD1O14545 582 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CDX4O14627 284 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 TM4SF5O14894 197 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 PPP1R12AO14974 1030 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 MUSKO15146 869 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 MTSS1O43312 755 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 MAGEC1O60732 1142 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ZNF189O75820 626 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CCDC175P0C221 793 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ZNF883P0CG24 379 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CCNB1P14635 433 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 TIMP2P16035 220 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ENGP17813 658 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 GKP32189 559 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CETN2P41208 172 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 RWDD2BP57060 319 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 IFI35P80217 286 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 BCL2L1Q07817 233 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 SLC14A1Q13336 389 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 PUM1Q14671 1186 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 AGERQ15109 404 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CCDC6Q16204 474 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 UGP2Q16851 508 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ZNF284Q2VY69 593 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 POM121L1PQ3SYA9 428 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 BBS12Q6ZW61 710 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 TTC7BQ86TV6 843 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 CCDC13Q8IYE1 715 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 ZCCHC9Q8N567 271 aaKnown RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 MFSD2AQ8NA29 543 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 IL12RB2Q99665 862 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 DESI2Q9BSY9 194 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 C1QTNF2Q9BXJ5 285 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 POLR1EQ9GZS1 481 aaKnown RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 EBF2Q9HAK2 575 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 TMEM9BQ9NQ34 198 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 DNAAF2Q9NVR5 837 aaKnown RBP15.63■□□□□ 0.09
C9orf3-217ENST00000479161 AMFRQ9UKV5 643 aa15.63■□□□□ 0.09
C9orf3-217ENST00000479161 DNAH14Q0VDD8 3507 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 A0A1W2PQU0 124 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 PLK4O00444 970 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 INSIG1O15503 277 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 CST8O60676 142 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 CFIP05156 583 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 NFKBIAP25963 317 aa15.62■□□□□ 0.09
C9orf3-217ENST00000479161 SCNN1BP51168 640 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms