RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 PLPP6Q8IY26 295 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 CACTIN-AS1Q8N1I8 211 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 OXR1Q8N573 874 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 BTBD6Q96KE9 485 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 PACSIN1Q9BY11 444 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TM6SF2Q9BZW4 377 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 KLC2Q9H0B6 622 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 KDM4CQ9H3R0 1056 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 IP6K2Q9UHH9 426 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.15
GARNL3-215ENST00000478702 LRRK1Q38SD2 2015 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 RNF103O00237 685 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 RRP8O43159 456 aaKnown RBP16.01■□□□□ 0.15
GARNL3-215ENST00000478702 SDC3O75056 442 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 LEFTY1O75610 366 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 TMCC1O94876 653 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 ACP1P24666 158 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 MAT2AP31153 395 aaKnown RBP16.01■□□□□ 0.15
GARNL3-215ENST00000478702 HCAR3P49019 387 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 NDST2P52849 883 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 ADKP55263 362 aaKnown RBP16.01■□□□□ 0.15
GARNL3-215ENST00000478702 DPYSQ14117 519 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 SMTNL2Q2TAL5 461 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 LEKR1Q6ZMV7 388 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 TRIM69Q86WT6 500 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 ZNF354CQ86Y25 554 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 DCBLD1Q8N8Z6 715 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 OR2AP1Q8NGE2 309 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 TEKT4Q8WW24 435 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
GARNL3-215ENST00000478702 FGF11Q92914 225 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 PPP1R16AQ96I34 528 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 HEPHQ9BQS7 1158 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CAAP1Q9H8G2 361 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 PDFQ9HBH1 243 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 PREBQ9HCU5 417 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
GARNL3-215ENST00000478702 UVRAGQ9P2Y5 699 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CLCA2Q9UQC9 943 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 CA5BQ9Y2D0 317 aa16.01■□□□□ 0.15
GARNL3-215ENST00000478702 TENM4Q6N022 2769 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 H3BRJ5 948 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 TRIM38O00635 465 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 BUB1O43683 1085 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 PLA2G2AP14555 144 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ERCC2P18074 760 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ITGB7P26010 798 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 DNA2P51530 1060 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 TAS2R38P59533 333 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 TSR1Q2NL82 804 aaKnown RBP16■□□□□ 0.15
GARNL3-215ENST00000478702 ARSIQ5FYB1 569 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 AFMIDQ63HM1 303 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 PRPF39Q86UA1 669 aaKnown RBP16■□□□□ 0.15
GARNL3-215ENST00000478702 IQCHQ86VS3 1027 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ZNF843Q8N446 348 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 NPWQ8N729 165 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 LSM14AQ8ND56 463 aaKnown RBP16■□□□□ 0.15
GARNL3-215ENST00000478702 CHP1Q99653 195 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 HDAC8Q9BY41 377 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 TRIM5Q9C035 493 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 ZWILCHQ9H900 591 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 DYRK4Q9NR20 520 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
GARNL3-215ENST00000478702 RP1P56715 2156 aa16■□□□□ 0.15
GARNL3-215ENST00000478702 MYO1FO00160 1098 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 SIGLEC6O43699 453 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 AKR1B10O60218 316 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 H2AFZP0C0S5 128 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 TMEM253P0C7T8 217 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 RARAP10276 462 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 NEK3P51956 506 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
GARNL3-215ENST00000478702 TLE3Q04726 772 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 CCDC15Q0P6D6 951 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 TBC1D25Q3MII6 688 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 BOLA3Q53S33 107 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 INO80DQ53TQ3 878 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-215ENST00000478702 TXNRD3NBQ6F5E7 133 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 H2AFVQ71UI9 128 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 ERN2Q76MJ5 926 aaKnown RBP15.99■□□□□ 0.15
GARNL3-215ENST00000478702 GPR155Q7Z3F1 870 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 SPACA3Q8IXA5 215 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 SLC25A45Q8N413 288 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 OR6K2Q8NGY2 324 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 HSPH1Q92598 858 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 VOPP1Q96AW1 172 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 CELF6Q96J87 481 aaKnown RBP15.99■□□□□ 0.15
GARNL3-215ENST00000478702 GDAP1L1Q96MZ0 367 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 NHEJ1Q9H9Q4 299 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-215ENST00000478702 SPTLC3Q9NUV7 552 aa15.99■□□□□ 0.15
GARNL3-215ENST00000478702 CTTNBP2NLQ9P2B4 639 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms