RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GJC1P36383 396 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ALDH7A1P49419 539 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 RPP30P78346 268 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ARHGAP8P85298 464 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 NFIL3Q16649 462 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 MTFR2Q6P444 385 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 GJB7Q6PEY0 223 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 RBM44Q6ZP01 1051 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 MDGA2Q7Z553 956 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 BRSK2Q8IWQ3 736 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 PAQR4Q8N4S7 273 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 RBMXL3Q8N7X1 1067 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 OR52N4Q8NGI2 321 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZFPM2Q8WW38 1151 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 NCSTNQ92542 709 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ELP4Q96EB1 424 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 CLSTN3Q9BQT9 956 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ABHD14AQ9BUJ0 271 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 NPLQ9BXD5 320 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 INTS2Q9H0H0 1204 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 MROH8Q9H579 483 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 RRP7BPQ9NSQ0 103 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 OLA1Q9NTK5 396 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 HCN3Q9P1Z3 774 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 OSGIN2Q9Y236 505 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 SCINQ9Y6U3 715 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 TMEM2Q9UHN6 1383 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 ITSN1Q15811 1721 aa4.35□□□□□ -1.71
CDC42BPA-212ENST00000478573 C17orf100A8MU93 164 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 RTN3O95197 1032 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 HNF1BP35680 557 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 SOX2P48431 317 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 DCAF7P61962 342 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 PTP4A2Q12974 167 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 BYSLQ13895 437 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ANXA2RQ3ZCQ2 193 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZNF766Q5HY98 468 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 AADACL2Q6P093 401 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 DLK2Q6UY11 383 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 C4orf50Q6ZRC1 276 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 UEVLDQ8IX04 471 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC44A5Q8NCS7 719 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 TDRD7Q8NHU6 1098 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 NFKBIDQ8NI38 313 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 C2CD4CQ8TF44 421 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ZNF347Q96SE7 839 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLCO5A1Q9H2Y9 848 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 TTC12Q9H892 705 aaPredicted RBP4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 MOV10Q9HCE1 1003 aaKnown RBP4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 TBC1D22BQ9NU19 505 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 BLOC1S4Q9NUP1 217 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 TMEM248Q9NWD8 314 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ALKBH4Q9NXW9 302 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 HDAC6Q9UBN7 1215 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 AASSQ9UDR5 926 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC25A13Q9UJS0 675 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 PLEKHG1Q9ULL1 1385 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 RIMS2Q9UQ26 1411 aa4.34□□□□□ -1.71
CDC42BPA-212ENST00000478573 ARHGEF28Q8N1W1 1705 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 FMN2Q9NZ56 1722 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 KIF1AQ12756 1690 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 COL16A1Q07092 1604 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 AHDC1Q5TGY3 1603 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 MED1Q15648 1581 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 PIK3R4Q99570 1358 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 KCNJ18B7U540 433 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNPO2O14787 897 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 SYN3O14994 580 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 SPTLC2O15270 562 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 EPN2O95208 641 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 NGFRP08138 427 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 FGF2P09038 288 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 GSTM2P28161 218 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 MTNR1AP48039 350 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 CCR9P51686 369 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 PTGR1Q14914 329 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 INPP5JQ15735 1006 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 SH2D4BQ5SQS7 431 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 VWA5B1Q5TIE3 1220 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADGRG6Q86SQ4 1221 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 RHPN2Q8IUC4 686 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 ADHFE1Q8IWW8 467 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 TNIP2Q8NFZ5 429 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 B4GALNT2Q8NHY0 566 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 FAM110DQ8TAY7 271 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 UCMAQ8WVF2 138 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 RAB40AQ8WXH6 277 aa4.33□□□□□ -1.72
CDC42BPA-212ENST00000478573 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms